Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NPAS1Q99742 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS1Q99742 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS1Q99742 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS1Q99742 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NPAS1Q99742 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS1Q99742 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS1Q99742 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS1Q99742 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.73■□□□□ 0.11
NPAS1Q99742 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
NPAS1Q99742 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC15.73■□□□□ 0.11
NPAS1Q99742 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS1Q99742 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.73■□□□□ 0.11
NPAS1Q99742 RPS2P1-201ENST00000434010 821 ntBASIC15.73■□□□□ 0.11
NPAS1Q99742 TPM4P1-201ENST00000436100 807 ntBASIC15.73■□□□□ 0.11
NPAS1Q99742 FAAHP1-202ENST00000446499 1238 ntBASIC15.73■□□□□ 0.11
NPAS1Q99742 RNPS1P1-201ENST00000507437 918 ntBASIC15.73■□□□□ 0.11
NPAS1Q99742 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.73■□□□□ 0.11
NPAS1Q99742 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.73■□□□□ 0.11
NPAS1Q99742 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.73■□□□□ 0.11
NPAS1Q99742 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.73■□□□□ 0.11
NPAS1Q99742 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.73■□□□□ 0.11
NPAS1Q99742 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.73■□□□□ 0.11
NPAS1Q99742 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
NPAS1Q99742 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS1Q99742 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS1Q99742 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS1Q99742 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS1Q99742 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NPAS1Q99742 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS1Q99742 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
NPAS1Q99742 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS1Q99742 AC097637.2-201ENST00000624096 1997 ntBASIC15.73■□□□□ 0.11
NPAS1Q99742 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS1Q99742 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS1Q99742 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS1Q99742 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
NPAS1Q99742 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS1Q99742 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS1Q99742 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS1Q99742 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.72■□□□□ 0.11
NPAS1Q99742 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS1Q99742 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS1Q99742 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.72■□□□□ 0.11
NPAS1Q99742 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NPAS1Q99742 AC080080.1-201ENST00000625121 2420 ntBASIC15.72■□□□□ 0.11
NPAS1Q99742 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS1Q99742 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS1Q99742 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NPAS1Q99742 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.72■□□□□ 0.11
NPAS1Q99742 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS1Q99742 SIGLEC30P-201ENST00000455569 941 ntBASIC15.72■□□□□ 0.11
NPAS1Q99742 AC018712.1-201ENST00000455767 687 ntBASIC15.72■□□□□ 0.11
NPAS1Q99742 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.72■□□□□ 0.11
NPAS1Q99742 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS1Q99742 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.72■□□□□ 0.11
NPAS1Q99742 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.72■□□□□ 0.11
NPAS1Q99742 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.72■□□□□ 0.11
NPAS1Q99742 SLC25A6P4-201ENST00000586535 553 ntBASIC15.72■□□□□ 0.11
NPAS1Q99742 AL049840.3-201ENST00000602669 611 ntBASIC15.72■□□□□ 0.11
NPAS1Q99742 AL022326.1-202ENST00000641533 845 ntBASIC15.72■□□□□ 0.11
NPAS1Q99742 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC15.72■□□□□ 0.11
NPAS1Q99742 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NPAS1Q99742 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS1Q99742 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS1Q99742 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NPAS1Q99742 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.72■□□□□ 0.11
NPAS1Q99742 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS1Q99742 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
NPAS1Q99742 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS1Q99742 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS1Q99742 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS1Q99742 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.72■□□□□ 0.11
NPAS1Q99742 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS1Q99742 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
NPAS1Q99742 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
NPAS1Q99742 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS1Q99742 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS1Q99742 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS1Q99742 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS1Q99742 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.71■□□□□ 0.11
NPAS1Q99742 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS1Q99742 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NPAS1Q99742 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
NPAS1Q99742 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
NPAS1Q99742 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS1Q99742 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS1Q99742 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.71■□□□□ 0.11
NPAS1Q99742 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS1Q99742 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
NPAS1Q99742 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.71■□□□□ 0.11
NPAS1Q99742 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.71■□□□□ 0.11
NPAS1Q99742 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS1Q99742 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS1Q99742 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.71■□□□□ 0.11
NPAS1Q99742 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.71■□□□□ 0.11
NPAS1Q99742 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
NPAS1Q99742 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.71■□□□□ 0.11
NPAS1Q99742 PRYP5-201ENST00000451909 266 ntBASIC15.71■□□□□ 0.11
NPAS1Q99742 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms