Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.6■□□□□ 0.25
CDC6Q99741 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.6■□□□□ 0.25
CDC6Q99741 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.6■□□□□ 0.25
CDC6Q99741 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC6Q99741 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDC6Q99741 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDC6Q99741 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC6Q99741 GK-202ENST00000378941 458 ntTSL 3 BASIC16.6■□□□□ 0.25
CDC6Q99741 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDC6Q99741 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.6■□□□□ 0.25
CDC6Q99741 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.6■□□□□ 0.25
CDC6Q99741 SLC25A6P2-201ENST00000497974 877 ntBASIC16.6■□□□□ 0.25
CDC6Q99741 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.6■□□□□ 0.25
CDC6Q99741 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.6■□□□□ 0.25
CDC6Q99741 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.6■□□□□ 0.25
CDC6Q99741 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.6■□□□□ 0.25
CDC6Q99741 AC243562.1-201ENST00000560672 389 ntBASIC16.6■□□□□ 0.25
CDC6Q99741 RN7SL204P-201ENST00000582831 262 ntBASIC16.6■□□□□ 0.25
CDC6Q99741 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC6Q99741 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.6■□□□□ 0.25
CDC6Q99741 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC6Q99741 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDC6Q99741 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.6■□□□□ 0.25
CDC6Q99741 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC6Q99741 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.6■□□□□ 0.25
CDC6Q99741 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CDC6Q99741 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC6Q99741 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC6Q99741 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC6Q99741 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC6Q99741 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDC6Q99741 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDC6Q99741 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC6Q99741 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC6Q99741 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDC6Q99741 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDC6Q99741 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.59■□□□□ 0.25
CDC6Q99741 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.59■□□□□ 0.25
CDC6Q99741 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
CDC6Q99741 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDC6Q99741 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDC6Q99741 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC6Q99741 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC6Q99741 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDC6Q99741 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC6Q99741 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDC6Q99741 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.59■□□□□ 0.25
CDC6Q99741 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDC6Q99741 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.59■□□□□ 0.25
CDC6Q99741 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.59■□□□□ 0.25
CDC6Q99741 SPDYE7P-202ENST00000420373 878 ntBASIC16.59■□□□□ 0.25
CDC6Q99741 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.59■□□□□ 0.25
CDC6Q99741 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.59■□□□□ 0.25
CDC6Q99741 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC6Q99741 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC6Q99741 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.59■□□□□ 0.25
CDC6Q99741 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC6Q99741 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.59■□□□□ 0.25
CDC6Q99741 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.59■□□□□ 0.25
CDC6Q99741 IGHV3-62-201ENST00000520057 340 ntBASIC16.59■□□□□ 0.25
CDC6Q99741 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.59■□□□□ 0.25
CDC6Q99741 AL135744.1-201ENST00000565098 629 ntBASIC16.59■□□□□ 0.25
CDC6Q99741 AC140878.1-201ENST00000565277 250 ntBASIC16.59■□□□□ 0.25
CDC6Q99741 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CDC6Q99741 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CDC6Q99741 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC6Q99741 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDC6Q99741 HTR7P1-202ENST00000624664 4411 ntBASIC16.59■□□□□ 0.25
CDC6Q99741 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC6Q99741 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDC6Q99741 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.59■□□□□ 0.25
CDC6Q99741 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC6Q99741 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CDC6Q99741 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CDC6Q99741 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC6Q99741 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDC6Q99741 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CDC6Q99741 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDC6Q99741 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CDC6Q99741 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDC6Q99741 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CDC6Q99741 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CDC6Q99741 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDC6Q99741 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDC6Q99741 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.58■□□□□ 0.24
CDC6Q99741 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
CDC6Q99741 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDC6Q99741 RBPMS2P1-201ENST00000437762 623 ntBASIC16.58■□□□□ 0.24
CDC6Q99741 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
CDC6Q99741 AL512638.1-201ENST00000457493 794 ntBASIC16.58■□□□□ 0.24
CDC6Q99741 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.58■□□□□ 0.24
CDC6Q99741 KRT8P23-201ENST00000560090 1207 ntBASIC16.58■□□□□ 0.24
CDC6Q99741 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDC6Q99741 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDC6Q99741 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.58■□□□□ 0.24
CDC6Q99741 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.58■□□□□ 0.24
CDC6Q99741 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.58■□□□□ 0.24
CDC6Q99741 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CDC6Q99741 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDC6Q99741 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms