Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 RARRES2P8-201ENST00000566335 367 ntBASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CSMD1Q96PZ7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 AC009949.1-201ENST00000623048 1830 ntBASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 AC104794.3-201ENST00000566840 1248 ntBASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CSMD1Q96PZ7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CSMD1Q96PZ7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSMD1Q96PZ7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSMD1Q96PZ7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSMD1Q96PZ7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSMD1Q96PZ7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CSMD1Q96PZ7 BNIP3P42-201ENST00000454982 569 ntBASIC14.52□□□□□ -0.08
CSMD1Q96PZ7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.52□□□□□ -0.08
CSMD1Q96PZ7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.52□□□□□ -0.08
CSMD1Q96PZ7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
CSMD1Q96PZ7 MIR4453-201ENST00000584019 89 ntBASIC14.52□□□□□ -0.08
CSMD1Q96PZ7 STK25P1-201ENST00000585406 838 ntBASIC14.52□□□□□ -0.08
CSMD1Q96PZ7 BNIP3P29-201ENST00000598302 571 ntBASIC14.52□□□□□ -0.08
CSMD1Q96PZ7 AC008494.3-201ENST00000606615 944 ntBASIC14.52□□□□□ -0.08
CSMD1Q96PZ7 AC011447.5-201ENST00000616168 564 ntBASIC14.52□□□□□ -0.08
CSMD1Q96PZ7 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
CSMD1Q96PZ7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CSMD1Q96PZ7 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CSMD1Q96PZ7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSMD1Q96PZ7 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSMD1Q96PZ7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSMD1Q96PZ7 PHGDH-209ENST00000641074 1780 ntBASIC14.52□□□□□ -0.08
CSMD1Q96PZ7 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC14.52□□□□□ -0.09
CSMD1Q96PZ7 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CSMD1Q96PZ7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CSMD1Q96PZ7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CSMD1Q96PZ7 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CSMD1Q96PZ7 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CSMD1Q96PZ7 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.52□□□□□ -0.09
CSMD1Q96PZ7 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSMD1Q96PZ7 MIR6080-201ENST00000617359 66 ntBASIC14.52□□□□□ -0.09
CSMD1Q96PZ7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CSMD1Q96PZ7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSMD1Q96PZ7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSMD1Q96PZ7 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CSMD1Q96PZ7 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSMD1Q96PZ7 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.52□□□□□ -0.09
CSMD1Q96PZ7 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC14.52□□□□□ -0.09
CSMD1Q96PZ7 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.52□□□□□ -0.09
CSMD1Q96PZ7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CSMD1Q96PZ7 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.52□□□□□ -0.09
CSMD1Q96PZ7 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.52□□□□□ -0.09
CSMD1Q96PZ7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CSMD1Q96PZ7 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.52□□□□□ -0.09
CSMD1Q96PZ7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSMD1Q96PZ7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms