Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.51■□□□□ 0.55
ALPK3Q96L96 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ALPK3Q96L96 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.51■□□□□ 0.55
ALPK3Q96L96 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ALPK3Q96L96 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ALPK3Q96L96 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.51■□□□□ 0.55
ALPK3Q96L96 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.51■□□□□ 0.55
ALPK3Q96L96 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ALPK3Q96L96 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ALPK3Q96L96 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ALPK3Q96L96 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ALPK3Q96L96 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ALPK3Q96L96 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ALPK3Q96L96 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC18.51■□□□□ 0.55
ALPK3Q96L96 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ALPK3Q96L96 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ALPK3Q96L96 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ALPK3Q96L96 RPL37AP1-201ENST00000412502 279 ntBASIC18.51■□□□□ 0.55
ALPK3Q96L96 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.51■□□□□ 0.55
ALPK3Q96L96 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.51■□□□□ 0.55
ALPK3Q96L96 USP32P1-208ENST00000506594 1164 ntBASIC18.51■□□□□ 0.55
ALPK3Q96L96 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC18.51■□□□□ 0.55
ALPK3Q96L96 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ALPK3Q96L96 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.51■□□□□ 0.55
ALPK3Q96L96 AL512343.1-201ENST00000605837 169 ntBASIC18.51■□□□□ 0.55
ALPK3Q96L96 MIR6787-201ENST00000616675 61 ntBASIC18.51■□□□□ 0.55
ALPK3Q96L96 GPR182-203ENST00000622922 591 ntBASIC18.51■□□□□ 0.55
ALPK3Q96L96 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ALPK3Q96L96 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ALPK3Q96L96 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ALPK3Q96L96 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ALPK3Q96L96 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ALPK3Q96L96 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ALPK3Q96L96 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.5■□□□□ 0.55
ALPK3Q96L96 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ALPK3Q96L96 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.5■□□□□ 0.55
ALPK3Q96L96 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
ALPK3Q96L96 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.5■□□□□ 0.55
ALPK3Q96L96 HLA-DPB2-205ENST00000435074 1188 ntBASIC18.5■□□□□ 0.55
ALPK3Q96L96 AC099548.2-209ENST00000480264 625 ntBASIC18.5■□□□□ 0.55
ALPK3Q96L96 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.5■□□□□ 0.55
ALPK3Q96L96 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.5■□□□□ 0.55
ALPK3Q96L96 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.5■□□□□ 0.55
ALPK3Q96L96 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.5■□□□□ 0.55
ALPK3Q96L96 AL133215.2-201ENST00000609242 977 ntBASIC18.5■□□□□ 0.55
ALPK3Q96L96 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.5■□□□□ 0.55
ALPK3Q96L96 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.5■□□□□ 0.55
ALPK3Q96L96 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
ALPK3Q96L96 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ALPK3Q96L96 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ALPK3Q96L96 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ALPK3Q96L96 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ALPK3Q96L96 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ALPK3Q96L96 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ALPK3Q96L96 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ALPK3Q96L96 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ALPK3Q96L96 AP000997.3-201ENST00000623333 2250 ntBASIC18.49■□□□□ 0.55
ALPK3Q96L96 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ALPK3Q96L96 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.49■□□□□ 0.55
ALPK3Q96L96 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.49■□□□□ 0.55
ALPK3Q96L96 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALPK3Q96L96 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
ALPK3Q96L96 AL023806.1-201ENST00000603994 1649 ntBASIC18.49■□□□□ 0.55
ALPK3Q96L96 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.49■□□□□ 0.55
ALPK3Q96L96 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ALPK3Q96L96 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALPK3Q96L96 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALPK3Q96L96 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.49■□□□□ 0.55
ALPK3Q96L96 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALPK3Q96L96 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.49■□□□□ 0.55
ALPK3Q96L96 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.49■□□□□ 0.55
ALPK3Q96L96 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALPK3Q96L96 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALPK3Q96L96 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ALPK3Q96L96 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.49■□□□□ 0.55
ALPK3Q96L96 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.49■□□□□ 0.55
ALPK3Q96L96 AC007389.4-201ENST00000454674 793 ntBASIC18.49■□□□□ 0.55
ALPK3Q96L96 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC18.49■□□□□ 0.55
ALPK3Q96L96 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.49■□□□□ 0.55
ALPK3Q96L96 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALPK3Q96L96 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ALPK3Q96L96 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALPK3Q96L96 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.48■□□□□ 0.55
ALPK3Q96L96 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.48■□□□□ 0.55
ALPK3Q96L96 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ALPK3Q96L96 KRT8P44-201ENST00000441609 1350 ntBASIC18.48■□□□□ 0.55
ALPK3Q96L96 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALPK3Q96L96 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
ALPK3Q96L96 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALPK3Q96L96 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ALPK3Q96L96 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC18.48■□□□□ 0.55
ALPK3Q96L96 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC18.48■□□□□ 0.55
ALPK3Q96L96 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALPK3Q96L96 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC18.48■□□□□ 0.55
ALPK3Q96L96 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALPK3Q96L96 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ALPK3Q96L96 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ALPK3Q96L96 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ALPK3Q96L96 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ALPK3Q96L96 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms