Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.24■□□□□ 0.51
TRIM11Q96F44 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM11Q96F44 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM11Q96F44 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
TRIM11Q96F44 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM11Q96F44 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM11Q96F44 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM11Q96F44 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM11Q96F44 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM11Q96F44 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM11Q96F44 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM11Q96F44 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TRIM11Q96F44 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM11Q96F44 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM11Q96F44 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
TRIM11Q96F44 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM11Q96F44 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM11Q96F44 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM11Q96F44 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
TRIM11Q96F44 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM11Q96F44 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRIM11Q96F44 AC099336.1-202ENST00000602961 463 ntBASIC18.24■□□□□ 0.51
TRIM11Q96F44 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
TRIM11Q96F44 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM11Q96F44 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM11Q96F44 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
TRIM11Q96F44 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM11Q96F44 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM11Q96F44 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM11Q96F44 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM11Q96F44 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.24■□□□□ 0.51
TRIM11Q96F44 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM11Q96F44 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.24■□□□□ 0.51
TRIM11Q96F44 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TRIM11Q96F44 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM11Q96F44 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
TRIM11Q96F44 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
TRIM11Q96F44 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM11Q96F44 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRIM11Q96F44 SIGLEC16-201ENST00000599858 1437 ntBASIC18.23■□□□□ 0.51
TRIM11Q96F44 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM11Q96F44 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM11Q96F44 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM11Q96F44 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM11Q96F44 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
TRIM11Q96F44 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM11Q96F44 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM11Q96F44 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM11Q96F44 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRIM11Q96F44 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM11Q96F44 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
TRIM11Q96F44 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM11Q96F44 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.23■□□□□ 0.51
TRIM11Q96F44 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM11Q96F44 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
TRIM11Q96F44 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM11Q96F44 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRIM11Q96F44 ABCD1P5-201ENST00000445663 754 ntBASIC18.23■□□□□ 0.51
TRIM11Q96F44 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.23■□□□□ 0.51
TRIM11Q96F44 KRT18P35-201ENST00000510488 1269 ntBASIC18.23■□□□□ 0.51
TRIM11Q96F44 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.23■□□□□ 0.51
TRIM11Q96F44 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.23■□□□□ 0.51
TRIM11Q96F44 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
TRIM11Q96F44 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM11Q96F44 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
TRIM11Q96F44 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM11Q96F44 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM11Q96F44 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM11Q96F44 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM11Q96F44 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM11Q96F44 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM11Q96F44 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM11Q96F44 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.23■□□□□ 0.51
TRIM11Q96F44 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRIM11Q96F44 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM11Q96F44 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM11Q96F44 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM11Q96F44 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM11Q96F44 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM11Q96F44 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM11Q96F44 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM11Q96F44 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM11Q96F44 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM11Q96F44 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM11Q96F44 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM11Q96F44 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
TRIM11Q96F44 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRIM11Q96F44 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM11Q96F44 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM11Q96F44 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM11Q96F44 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM11Q96F44 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM11Q96F44 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM11Q96F44 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM11Q96F44 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC18.22■□□□□ 0.51
TRIM11Q96F44 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM11Q96F44 AC092119.3-201ENST00000612618 583 ntBASIC18.22■□□□□ 0.51
TRIM11Q96F44 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM11Q96F44 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM11Q96F44 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms