Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
RNF183Q96D59 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
RNF183Q96D59 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RNF183Q96D59 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
RNF183Q96D59 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.84□□□□□ -0.35
RNF183Q96D59 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
RNF183Q96D59 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
RNF183Q96D59 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
RNF183Q96D59 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
RNF183Q96D59 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
RNF183Q96D59 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RNF183Q96D59 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC12.83□□□□□ -0.35
RNF183Q96D59 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
RNF183Q96D59 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.35
RNF183Q96D59 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.36
RNF183Q96D59 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC12.83□□□□□ -0.36
RNF183Q96D59 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.83□□□□□ -0.36
RNF183Q96D59 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC12.83□□□□□ -0.36
RNF183Q96D59 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
RNF183Q96D59 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RNF183Q96D59 PMPCAP1-201ENST00000508114 1576 ntBASIC12.83□□□□□ -0.36
RNF183Q96D59 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF183Q96D59 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF183Q96D59 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF183Q96D59 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF183Q96D59 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF183Q96D59 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
RNF183Q96D59 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
RNF183Q96D59 TEX30-205ENST00000376029 959 ntTSL 2 BASIC12.83□□□□□ -0.36
RNF183Q96D59 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RNF183Q96D59 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.83□□□□□ -0.36
RNF183Q96D59 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC12.83□□□□□ -0.36
RNF183Q96D59 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RNF183Q96D59 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.83□□□□□ -0.36
RNF183Q96D59 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC12.83□□□□□ -0.36
RNF183Q96D59 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.83□□□□□ -0.36
RNF183Q96D59 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC12.83□□□□□ -0.36
RNF183Q96D59 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC12.83□□□□□ -0.36
RNF183Q96D59 NKAPP1-205ENST00000585790 367 ntBASIC12.83□□□□□ -0.36
RNF183Q96D59 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC12.83□□□□□ -0.36
RNF183Q96D59 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.83□□□□□ -0.36
RNF183Q96D59 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
RNF183Q96D59 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.83□□□□□ -0.36
RNF183Q96D59 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.83□□□□□ -0.36
RNF183Q96D59 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.36
RNF183Q96D59 ADM-208ENST00000534464 1640 ntTSL 2 BASIC12.83□□□□□ -0.36
RNF183Q96D59 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC12.83□□□□□ -0.36
RNF183Q96D59 LINC00896-202ENST00000609602 2128 ntBASIC12.83□□□□□ -0.36
RNF183Q96D59 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF183Q96D59 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF183Q96D59 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
RNF183Q96D59 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF183Q96D59 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF183Q96D59 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF183Q96D59 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC12.83□□□□□ -0.36
RNF183Q96D59 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
RNF183Q96D59 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RNF183Q96D59 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC12.82□□□□□ -0.36
RNF183Q96D59 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC12.82□□□□□ -0.36
RNF183Q96D59 CROCCP2-202ENST00000412962 2773 ntBASIC12.82□□□□□ -0.36
RNF183Q96D59 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC12.82□□□□□ -0.36
RNF183Q96D59 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
RNF183Q96D59 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RNF183Q96D59 OR6D1P-202ENST00000641007 5290 ntBASIC12.82□□□□□ -0.36
RNF183Q96D59 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 REXO1L9P-201ENST00000604264 2108 ntBASIC12.82□□□□□ -0.36
RNF183Q96D59 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 AC079776.2-201ENST00000641154 1609 ntBASIC12.82□□□□□ -0.36
RNF183Q96D59 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
RNF183Q96D59 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 AP000347.1-202ENST00000435868 847 ntBASIC12.82□□□□□ -0.36
RNF183Q96D59 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.82□□□□□ -0.36
RNF183Q96D59 DDX43P3-201ENST00000441064 443 ntBASIC12.82□□□□□ -0.36
RNF183Q96D59 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
RNF183Q96D59 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.82□□□□□ -0.36
RNF183Q96D59 OR7E14P-202ENST00000530490 1290 ntBASIC12.82□□□□□ -0.36
RNF183Q96D59 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC12.82□□□□□ -0.36
RNF183Q96D59 AC139887.3-201ENST00000568585 713 ntBASIC12.82□□□□□ -0.36
RNF183Q96D59 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
RNF183Q96D59 FAM215A-202ENST00000632077 792 ntBASIC12.82□□□□□ -0.36
RNF183Q96D59 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.82□□□□□ -0.36
RNF183Q96D59 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
RNF183Q96D59 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.82□□□□□ -0.36
RNF183Q96D59 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
RNF183Q96D59 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
RNF183Q96D59 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms