Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 FAM220CP-201ENST00000395253 831 ntBASIC19.46■□□□□ 0.71
SMARCE1Q969G3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.46■□□□□ 0.71
SMARCE1Q969G3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 KRT8P10-201ENST00000450021 1447 ntBASIC19.45■□□□□ 0.7
SMARCE1Q969G3 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 RCN1P1-201ENST00000400413 996 ntBASIC19.45■□□□□ 0.7
SMARCE1Q969G3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 KRT8P26-201ENST00000534154 1276 ntBASIC19.45■□□□□ 0.7
SMARCE1Q969G3 AL136038.3-201ENST00000561909 1096 ntBASIC19.45■□□□□ 0.7
SMARCE1Q969G3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.45■□□□□ 0.7
SMARCE1Q969G3 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 STK25P1-201ENST00000585406 838 ntBASIC19.44■□□□□ 0.7
SMARCE1Q969G3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC19.44■□□□□ 0.7
SMARCE1Q969G3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.43■□□□□ 0.7
SMARCE1Q969G3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms