Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A3Q93084 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A3Q93084 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ATP2A3Q93084 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A3Q93084 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATP2A3Q93084 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
ATP2A3Q93084 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.2■□□□□ 0.5
ATP2A3Q93084 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
ATP2A3Q93084 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
ATP2A3Q93084 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A3Q93084 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ATP2A3Q93084 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A3Q93084 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A3Q93084 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A3Q93084 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A3Q93084 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A3Q93084 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A3Q93084 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A3Q93084 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A3Q93084 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A3Q93084 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.19■□□□□ 0.5
ATP2A3Q93084 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP2A3Q93084 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A3Q93084 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.19■□□□□ 0.5
ATP2A3Q93084 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.19■□□□□ 0.5
ATP2A3Q93084 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP2A3Q93084 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ATP2A3Q93084 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP2A3Q93084 UNC93B6-202ENST00000528242 690 ntBASIC18.19■□□□□ 0.5
ATP2A3Q93084 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.19■□□□□ 0.5
ATP2A3Q93084 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A3Q93084 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
ATP2A3Q93084 PGM5P2-202ENST00000637225 1043 ntBASIC18.19■□□□□ 0.5
ATP2A3Q93084 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.19■□□□□ 0.5
ATP2A3Q93084 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A3Q93084 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A3Q93084 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
ATP2A3Q93084 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
ATP2A3Q93084 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A3Q93084 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A3Q93084 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A3Q93084 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A3Q93084 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
ATP2A3Q93084 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATP2A3Q93084 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.19■□□□□ 0.5
ATP2A3Q93084 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
ATP2A3Q93084 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A3Q93084 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A3Q93084 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A3Q93084 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ATP2A3Q93084 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A3Q93084 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A3Q93084 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ATP2A3Q93084 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A3Q93084 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A3Q93084 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ATP2A3Q93084 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.18■□□□□ 0.5
ATP2A3Q93084 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A3Q93084 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.18■□□□□ 0.5
ATP2A3Q93084 KRT18P3-201ENST00000451602 1288 ntBASIC18.18■□□□□ 0.5
ATP2A3Q93084 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
ATP2A3Q93084 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.18■□□□□ 0.5
ATP2A3Q93084 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP2A3Q93084 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
ATP2A3Q93084 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.18■□□□□ 0.5
ATP2A3Q93084 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.18■□□□□ 0.5
ATP2A3Q93084 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.18■□□□□ 0.5
ATP2A3Q93084 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A3Q93084 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
ATP2A3Q93084 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
ATP2A3Q93084 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.18■□□□□ 0.5
ATP2A3Q93084 AC005593.1-201ENST00000624894 515 ntBASIC18.18■□□□□ 0.5
ATP2A3Q93084 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A3Q93084 AC100803.2-201ENST00000562459 1963 ntBASIC18.18■□□□□ 0.5
ATP2A3Q93084 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP2A3Q93084 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
ATP2A3Q93084 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A3Q93084 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.18■□□□□ 0.5
ATP2A3Q93084 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
ATP2A3Q93084 NFIC-211ENST00000641145 8399 ntBASIC18.18■□□□□ 0.5
ATP2A3Q93084 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
ATP2A3Q93084 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.18■□□□□ 0.5
ATP2A3Q93084 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.17■□□□□ 0.5
ATP2A3Q93084 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A3Q93084 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.17■□□□□ 0.5
ATP2A3Q93084 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A3Q93084 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A3Q93084 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A3Q93084 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
ATP2A3Q93084 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A3Q93084 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.17■□□□□ 0.5
ATP2A3Q93084 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
ATP2A3Q93084 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A3Q93084 AL020989.1-201ENST00000422979 469 ntBASIC18.17■□□□□ 0.5
ATP2A3Q93084 KRT18P27-201ENST00000427733 1299 ntBASIC18.17■□□□□ 0.5
ATP2A3Q93084 RNA5SP416-201ENST00000516838 111 ntBASIC18.17■□□□□ 0.5
ATP2A3Q93084 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.17■□□□□ 0.5
ATP2A3Q93084 AC116407.2-201ENST00000613639 860 ntBASIC18.17■□□□□ 0.5
ATP2A3Q93084 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
ATP2A3Q93084 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms