Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
HPS1Q92902 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
HPS1Q92902 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
HPS1Q92902 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HPS1Q92902 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS1Q92902 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.85■□□□□ 0.13
HPS1Q92902 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.85■□□□□ 0.13
HPS1Q92902 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS1Q92902 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS1Q92902 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.85■□□□□ 0.13
HPS1Q92902 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS1Q92902 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS1Q92902 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS1Q92902 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS1Q92902 RCC2P3-201ENST00000418112 1537 ntBASIC15.85■□□□□ 0.13
HPS1Q92902 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
HPS1Q92902 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS1Q92902 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
HPS1Q92902 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS1Q92902 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HPS1Q92902 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC15.85■□□□□ 0.13
HPS1Q92902 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HPS1Q92902 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.85■□□□□ 0.13
HPS1Q92902 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS1Q92902 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.85■□□□□ 0.13
HPS1Q92902 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS1Q92902 AKR1B10P2-201ENST00000577332 927 ntBASIC15.85■□□□□ 0.13
HPS1Q92902 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.85■□□□□ 0.13
HPS1Q92902 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS1Q92902 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
HPS1Q92902 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.85■□□□□ 0.13
HPS1Q92902 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC15.85■□□□□ 0.13
HPS1Q92902 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HPS1Q92902 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
HPS1Q92902 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS1Q92902 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HPS1Q92902 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HPS1Q92902 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HPS1Q92902 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.85■□□□□ 0.13
HPS1Q92902 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS1Q92902 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HPS1Q92902 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.85■□□□□ 0.13
HPS1Q92902 KRT8P32-201ENST00000512863 1461 ntBASIC15.84■□□□□ 0.13
HPS1Q92902 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS1Q92902 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.84■□□□□ 0.13
HPS1Q92902 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS1Q92902 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC15.84■□□□□ 0.13
HPS1Q92902 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS1Q92902 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS1Q92902 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HPS1Q92902 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
HPS1Q92902 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.84■□□□□ 0.13
HPS1Q92902 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS1Q92902 TBC1D3P2-202ENST00000577902 1649 ntBASIC15.84■□□□□ 0.13
HPS1Q92902 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.84■□□□□ 0.13
HPS1Q92902 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HPS1Q92902 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS1Q92902 AL109659.2-201ENST00000606809 1674 ntBASIC15.84■□□□□ 0.13
HPS1Q92902 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
HPS1Q92902 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS1Q92902 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.84■□□□□ 0.13
HPS1Q92902 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.84■□□□□ 0.13
HPS1Q92902 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.84■□□□□ 0.13
HPS1Q92902 LYSMD4-203ENST00000378904 2122 ntBASIC15.84■□□□□ 0.13
HPS1Q92902 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS1Q92902 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS1Q92902 AL671277.2-201ENST00000458060 996 ntBASIC15.84■□□□□ 0.13
HPS1Q92902 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC15.84■□□□□ 0.13
HPS1Q92902 MIR3180-5-201ENST00000583743 153 ntBASIC15.84■□□□□ 0.13
HPS1Q92902 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.84■□□□□ 0.13
HPS1Q92902 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.84■□□□□ 0.13
HPS1Q92902 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
HPS1Q92902 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.84■□□□□ 0.13
HPS1Q92902 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.84■□□□□ 0.13
HPS1Q92902 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HPS1Q92902 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
HPS1Q92902 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
HPS1Q92902 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS1Q92902 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS1Q92902 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS1Q92902 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS1Q92902 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
HPS1Q92902 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.84■□□□□ 0.13
HPS1Q92902 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HPS1Q92902 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms