Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX1Q92499 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DDX1Q92499 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DDX1Q92499 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DDX1Q92499 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX1Q92499 AF186996.4-201ENST00000467186 377 ntBASIC18.34■□□□□ 0.53
DDX1Q92499 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.34■□□□□ 0.53
DDX1Q92499 SLC25A1P1-201ENST00000528351 927 ntBASIC18.34■□□□□ 0.53
DDX1Q92499 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.34■□□□□ 0.53
DDX1Q92499 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.34■□□□□ 0.53
DDX1Q92499 AL139424.1-201ENST00000607572 797 ntBASIC18.34■□□□□ 0.53
DDX1Q92499 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
DDX1Q92499 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.34■□□□□ 0.53
DDX1Q92499 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.34■□□□□ 0.53
DDX1Q92499 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.34■□□□□ 0.53
DDX1Q92499 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.34■□□□□ 0.53
DDX1Q92499 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX1Q92499 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.34■□□□□ 0.53
DDX1Q92499 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX1Q92499 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX1Q92499 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX1Q92499 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.34■□□□□ 0.53
DDX1Q92499 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX1Q92499 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX1Q92499 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.34■□□□□ 0.53
DDX1Q92499 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.34■□□□□ 0.53
DDX1Q92499 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DDX1Q92499 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.34■□□□□ 0.53
DDX1Q92499 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DDX1Q92499 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
DDX1Q92499 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
DDX1Q92499 GPR89P-201ENST00000407924 1495 ntBASIC18.33■□□□□ 0.53
DDX1Q92499 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
DDX1Q92499 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.33■□□□□ 0.53
DDX1Q92499 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
DDX1Q92499 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
DDX1Q92499 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.33■□□□□ 0.53
DDX1Q92499 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.33■□□□□ 0.53
DDX1Q92499 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
DDX1Q92499 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX1Q92499 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX1Q92499 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX1Q92499 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DDX1Q92499 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX1Q92499 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.33■□□□□ 0.52
DDX1Q92499 AL031284.1-201ENST00000419297 478 ntBASIC18.33■□□□□ 0.52
DDX1Q92499 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DDX1Q92499 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.33■□□□□ 0.52
DDX1Q92499 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX1Q92499 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.33■□□□□ 0.52
DDX1Q92499 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
DDX1Q92499 RNA5SP419-201ENST00000515908 135 ntBASIC18.33■□□□□ 0.52
DDX1Q92499 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.33■□□□□ 0.52
DDX1Q92499 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.33■□□□□ 0.52
DDX1Q92499 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.33■□□□□ 0.52
DDX1Q92499 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
DDX1Q92499 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.33■□□□□ 0.52
DDX1Q92499 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.33■□□□□ 0.52
DDX1Q92499 AC079781.4-201ENST00000641908 219 ntBASIC18.33■□□□□ 0.52
DDX1Q92499 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX1Q92499 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
DDX1Q92499 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX1Q92499 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DDX1Q92499 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX1Q92499 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.33■□□□□ 0.52
DDX1Q92499 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX1Q92499 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX1Q92499 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.33■□□□□ 0.52
DDX1Q92499 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX1Q92499 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
DDX1Q92499 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.32■□□□□ 0.52
DDX1Q92499 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDX1Q92499 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
DDX1Q92499 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDX1Q92499 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX1Q92499 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX1Q92499 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX1Q92499 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.32■□□□□ 0.52
DDX1Q92499 RBM17P3-201ENST00000417687 1192 ntBASIC18.32■□□□□ 0.52
DDX1Q92499 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX1Q92499 LINC00982-205ENST00000420957 435 ntBASIC18.32■□□□□ 0.52
DDX1Q92499 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.32■□□□□ 0.52
DDX1Q92499 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.32■□□□□ 0.52
DDX1Q92499 PMS2P2-201ENST00000425039 1128 ntBASIC18.32■□□□□ 0.52
DDX1Q92499 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.32■□□□□ 0.52
DDX1Q92499 BX005266.1-201ENST00000473402 457 ntBASIC18.32■□□□□ 0.52
DDX1Q92499 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
DDX1Q92499 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
DDX1Q92499 NKAPP1-205ENST00000585790 367 ntBASIC18.32■□□□□ 0.52
DDX1Q92499 AC140113.2-201ENST00000604370 208 ntBASIC18.32■□□□□ 0.52
DDX1Q92499 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.32■□□□□ 0.52
DDX1Q92499 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.32■□□□□ 0.52
DDX1Q92499 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.32■□□□□ 0.52
DDX1Q92499 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX1Q92499 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX1Q92499 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
DDX1Q92499 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DDX1Q92499 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DDX1Q92499 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.32■□□□□ 0.52
DDX1Q92499 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms