Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNED1Q8TER0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNED1Q8TER0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.77■□□□□ 0.92
SNED1Q8TER0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SNED1Q8TER0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.77■□□□□ 0.92
SNED1Q8TER0 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNED1Q8TER0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SNED1Q8TER0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNED1Q8TER0 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNED1Q8TER0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNED1Q8TER0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SNED1Q8TER0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.77■□□□□ 0.92
SNED1Q8TER0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SNED1Q8TER0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SNED1Q8TER0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SNED1Q8TER0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SNED1Q8TER0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
SNED1Q8TER0 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.77■□□□□ 0.91
SNED1Q8TER0 AC142381.1-201ENST00000426099 345 ntBASIC20.77■□□□□ 0.91
SNED1Q8TER0 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC20.77■□□□□ 0.91
SNED1Q8TER0 IGHV3-62-201ENST00000520057 340 ntBASIC20.77■□□□□ 0.91
SNED1Q8TER0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
SNED1Q8TER0 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC20.77■□□□□ 0.91
SNED1Q8TER0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.77■□□□□ 0.91
SNED1Q8TER0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC20.77■□□□□ 0.91
SNED1Q8TER0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SNED1Q8TER0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SNED1Q8TER0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SNED1Q8TER0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNED1Q8TER0 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNED1Q8TER0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNED1Q8TER0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.76■□□□□ 0.91
SNED1Q8TER0 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNED1Q8TER0 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC20.76■□□□□ 0.91
SNED1Q8TER0 AC100757.3-201ENST00000622361 1406 ntBASIC20.76■□□□□ 0.91
SNED1Q8TER0 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
SNED1Q8TER0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.76■□□□□ 0.91
SNED1Q8TER0 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SNED1Q8TER0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNED1Q8TER0 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC20.76■□□□□ 0.91
SNED1Q8TER0 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC20.76■□□□□ 0.91
SNED1Q8TER0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.76■□□□□ 0.91
SNED1Q8TER0 NAA50-208ENST00000497255 789 ntTSL 5 BASIC20.76■□□□□ 0.91
SNED1Q8TER0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNED1Q8TER0 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC20.76■□□□□ 0.91
SNED1Q8TER0 AL031055.1-201ENST00000606362 631 ntBASIC20.76■□□□□ 0.91
SNED1Q8TER0 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SNED1Q8TER0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC20.76■□□□□ 0.91
SNED1Q8TER0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNED1Q8TER0 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SNED1Q8TER0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNED1Q8TER0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SNED1Q8TER0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNED1Q8TER0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SNED1Q8TER0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.75■□□□□ 0.91
SNED1Q8TER0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNED1Q8TER0 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC20.75■□□□□ 0.91
SNED1Q8TER0 OR8S1-201ENST00000310194 1080 ntBASIC20.75■□□□□ 0.91
SNED1Q8TER0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNED1Q8TER0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNED1Q8TER0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNED1Q8TER0 AC241585.1-201ENST00000433527 519 ntBASIC20.75■□□□□ 0.91
SNED1Q8TER0 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC20.75■□□□□ 0.91
SNED1Q8TER0 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SNED1Q8TER0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC20.75■□□□□ 0.91
SNED1Q8TER0 AL596325.1-201ENST00000563991 1082 ntBASIC20.75■□□□□ 0.91
SNED1Q8TER0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC20.75■□□□□ 0.91
SNED1Q8TER0 SPDYE12P-201ENST00000618416 771 ntBASIC20.75■□□□□ 0.91
SNED1Q8TER0 LINC01451-201ENST00000623792 534 ntBASIC20.75■□□□□ 0.91
SNED1Q8TER0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC20.75■□□□□ 0.91
SNED1Q8TER0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.75■□□□□ 0.91
SNED1Q8TER0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.75■□□□□ 0.91
SNED1Q8TER0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.75■□□□□ 0.91
SNED1Q8TER0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNED1Q8TER0 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SNED1Q8TER0 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNED1Q8TER0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNED1Q8TER0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SNED1Q8TER0 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNED1Q8TER0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SNED1Q8TER0 AL353732.1-201ENST00000569618 1459 ntBASIC20.74■□□□□ 0.91
SNED1Q8TER0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SNED1Q8TER0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.74■□□□□ 0.91
SNED1Q8TER0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNED1Q8TER0 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
SNED1Q8TER0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNED1Q8TER0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SNED1Q8TER0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SNED1Q8TER0 EDF1-203ENST00000371649 790 ntTSL 2 BASIC20.74■□□□□ 0.91
SNED1Q8TER0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC20.74■□□□□ 0.91
SNED1Q8TER0 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC20.74■□□□□ 0.91
SNED1Q8TER0 SPTLC1P1-201ENST00000447199 261 ntBASIC20.74■□□□□ 0.91
SNED1Q8TER0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SNED1Q8TER0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SNED1Q8TER0 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.74■□□□□ 0.91
SNED1Q8TER0 AC027307.2-201ENST00000591252 911 ntBASIC20.74■□□□□ 0.91
SNED1Q8TER0 AL662799.1-202ENST00000614205 422 ntBASIC20.74■□□□□ 0.91
SNED1Q8TER0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SNED1Q8TER0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.74■□□□□ 0.91
SNED1Q8TER0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms