Protein–RNA interactions for Protein: Q8TCZ7

LINC00308, Putative uncharacterized protein encoded by LINC00308, humanhuman

Predictions only

Length 52 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308Q8TCZ7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 UNC93B5-201ENST00000530315 699 ntBASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 AL138781.1-201ENST00000566567 1274 ntBASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 AC112497.1-201ENST00000624824 639 ntBASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 BID-213ENST00000615414 2236 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
LINC00308Q8TCZ7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 AL353807.1-201ENST00000427475 662 ntBASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 LY6E-205ENST00000519611 635 ntTSL 3 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 AC008403.3-201ENST00000598924 454 ntBASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
LINC00308Q8TCZ7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms