Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CLHC1Q8NHS4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLHC1Q8NHS4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.59■□□□□ 0.25
CLHC1Q8NHS4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLHC1Q8NHS4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLHC1Q8NHS4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLHC1Q8NHS4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLHC1Q8NHS4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.58■□□□□ 0.25
CLHC1Q8NHS4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLHC1Q8NHS4 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLHC1Q8NHS4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
CLHC1Q8NHS4 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CLHC1Q8NHS4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.58■□□□□ 0.25
CLHC1Q8NHS4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLHC1Q8NHS4 RNF216P1-203ENST00000404404 2427 ntBASIC16.58■□□□□ 0.25
CLHC1Q8NHS4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLHC1Q8NHS4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.58■□□□□ 0.25
CLHC1Q8NHS4 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 AC122714.2-201ENST00000502787 707 ntBASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 AC111152.3-201ENST00000569699 673 ntBASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 AP005901.3-202ENST00000581653 237 ntBASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 AC005332.1-201ENST00000577698 1310 ntBASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLHC1Q8NHS4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 BX276092.5-203ENST00000456199 560 ntBASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 NTF6B-201ENST00000591913 560 ntBASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CLHC1Q8NHS4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CLHC1Q8NHS4 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms