Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 NUS1P1-201ENST00000446295 882 ntBASIC16.15■□□□□ 0.18
NUP43Q8NFH3 AC132008.2-207ENST00000454517 770 ntBASIC16.15■□□□□ 0.18
NUP43Q8NFH3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.15■□□□□ 0.18
NUP43Q8NFH3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NUP43Q8NFH3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 AP005117.1-201ENST00000584346 1413 ntBASIC16.14■□□□□ 0.17
NUP43Q8NFH3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NUP43Q8NFH3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 SIGLEC16-201ENST00000599858 1437 ntBASIC16.13■□□□□ 0.17
NUP43Q8NFH3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 AC079776.2-201ENST00000641154 1609 ntBASIC16.13■□□□□ 0.17
NUP43Q8NFH3 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 AP001269.4-201ENST00000609611 512 ntBASIC16.13■□□□□ 0.17
NUP43Q8NFH3 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 CROCCP1-201ENST00000426910 5675 ntBASIC16.13■□□□□ 0.17
NUP43Q8NFH3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUP43Q8NFH3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 AC124947.2-201ENST00000547118 1133 ntBASIC16.12■□□□□ 0.17
NUP43Q8NFH3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.12■□□□□ 0.17
NUP43Q8NFH3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms