Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TMEM35BQ8NCS4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 GPR89P-201ENST00000407924 1495 ntBASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 LINC00982-205ENST00000420957 435 ntBASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 AC124947.2-201ENST00000547118 1133 ntBASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
TMEM35BQ8NCS4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TMEM35BQ8NCS4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TMEM35BQ8NCS4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TMEM35BQ8NCS4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.27■□□□□ 0.51
TMEM35BQ8NCS4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TMEM35BQ8NCS4 AC092053.1-201ENST00000605787 1936 ntBASIC18.27■□□□□ 0.51
TMEM35BQ8NCS4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TMEM35BQ8NCS4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.27■□□□□ 0.51
TMEM35BQ8NCS4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TMEM35BQ8NCS4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
TMEM35BQ8NCS4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.27■□□□□ 0.51
TMEM35BQ8NCS4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 SAPCD2P3-201ENST00000455031 850 ntBASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 FGFR3P6-201ENST00000457012 610 ntBASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 AC022211.2-201ENST00000585075 2527 ntBASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
TMEM35BQ8NCS4 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TMEM35BQ8NCS4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM35BQ8NCS4 AD000864.1-201ENST00000624076 2295 ntBASIC18.25■□□□□ 0.51
TMEM35BQ8NCS4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
TMEM35BQ8NCS4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
TMEM35BQ8NCS4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM35BQ8NCS4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM35BQ8NCS4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TMEM35BQ8NCS4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TMEM35BQ8NCS4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TMEM35BQ8NCS4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM35BQ8NCS4 AKR1C7P-201ENST00000305623 895 ntBASIC18.25■□□□□ 0.51
TMEM35BQ8NCS4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM35BQ8NCS4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
TMEM35BQ8NCS4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
TMEM35BQ8NCS4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.25■□□□□ 0.51
TMEM35BQ8NCS4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.25■□□□□ 0.51
TMEM35BQ8NCS4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
TMEM35BQ8NCS4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.25■□□□□ 0.51
TMEM35BQ8NCS4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.25■□□□□ 0.51
TMEM35BQ8NCS4 IFNL4P1-201ENST00000607083 540 ntBASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms