Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 AL022342.1-201ENST00000400363 863 ntBASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 KRT18P27-201ENST00000427733 1299 ntBASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 AC004706.3-202ENST00000621574 984 ntBASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PCDH20Q8N6Y1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 AC097637.2-201ENST00000624096 1997 ntBASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 AC092910.1-201ENST00000482027 1129 ntBASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 MIR1199-201ENST00000621445 119 ntBASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PCDH20Q8N6Y1 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 AL139424.1-201ENST00000607572 797 ntBASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 PGM5P2-202ENST00000637225 1043 ntBASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
PCDH20Q8N6Y1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 AC141586.5-201ENST00000624546 2050 ntBASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.61■□□□□ 0.41
PCDH20Q8N6Y1 ACTG1P4-201ENST00000425123 1122 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms