Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM48Q8IWZ4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM48Q8IWZ4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM48Q8IWZ4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM48Q8IWZ4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRIM48Q8IWZ4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.96■□□□□ 0.3
TRIM48Q8IWZ4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
TRIM48Q8IWZ4 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 PMS2P1-201ENST00000431037 1228 ntBASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 AC136632.2-201ENST00000512891 861 ntBASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 PGM5P2-202ENST00000637225 1043 ntBASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 AC104109.2-201ENST00000602919 1418 ntBASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.95■□□□□ 0.3
TRIM48Q8IWZ4 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 AC046185.3-201ENST00000623228 1824 ntBASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 AC006116.8-202ENST00000587620 1550 ntBASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM48Q8IWZ4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM48Q8IWZ4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms