Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
APLFQ8IW19 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
APLFQ8IW19 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.17■□□□□ 0.34
APLFQ8IW19 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.17■□□□□ 0.34
APLFQ8IW19 AC079781.3-201ENST00000449110 356 ntBASIC17.17■□□□□ 0.34
APLFQ8IW19 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.17■□□□□ 0.34
APLFQ8IW19 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.17■□□□□ 0.34
APLFQ8IW19 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.17■□□□□ 0.34
APLFQ8IW19 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.17■□□□□ 0.34
APLFQ8IW19 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APLFQ8IW19 AL662844.1-201ENST00000546340 181 ntBASIC17.17■□□□□ 0.34
APLFQ8IW19 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APLFQ8IW19 Z69720.1-201ENST00000601483 472 ntBASIC17.17■□□□□ 0.34
APLFQ8IW19 GPR32P1-201ENST00000601788 811 ntBASIC17.17■□□□□ 0.34
APLFQ8IW19 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APLFQ8IW19 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.17■□□□□ 0.34
APLFQ8IW19 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APLFQ8IW19 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APLFQ8IW19 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.17■□□□□ 0.34
APLFQ8IW19 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APLFQ8IW19 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.16■□□□□ 0.34
APLFQ8IW19 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.16■□□□□ 0.34
APLFQ8IW19 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APLFQ8IW19 AC233702.3-201ENST00000578656 1387 ntBASIC17.16■□□□□ 0.34
APLFQ8IW19 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APLFQ8IW19 AC106886.4-201ENST00000623557 2502 ntBASIC17.16■□□□□ 0.34
APLFQ8IW19 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
APLFQ8IW19 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APLFQ8IW19 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
APLFQ8IW19 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.16■□□□□ 0.34
APLFQ8IW19 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.16■□□□□ 0.34
APLFQ8IW19 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APLFQ8IW19 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.16■□□□□ 0.34
APLFQ8IW19 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
APLFQ8IW19 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APLFQ8IW19 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APLFQ8IW19 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APLFQ8IW19 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.16■□□□□ 0.34
APLFQ8IW19 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
APLFQ8IW19 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.16■□□□□ 0.34
APLFQ8IW19 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC17.16■□□□□ 0.34
APLFQ8IW19 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.16■□□□□ 0.34
APLFQ8IW19 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.16■□□□□ 0.34
APLFQ8IW19 AC074051.2-201ENST00000565115 352 ntBASIC17.16■□□□□ 0.34
APLFQ8IW19 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.16■□□□□ 0.34
APLFQ8IW19 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APLFQ8IW19 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.16■□□□□ 0.34
APLFQ8IW19 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.16■□□□□ 0.34
APLFQ8IW19 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
APLFQ8IW19 KRT8P32-201ENST00000512863 1461 ntBASIC17.16■□□□□ 0.34
APLFQ8IW19 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.16■□□□□ 0.34
APLFQ8IW19 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APLFQ8IW19 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APLFQ8IW19 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APLFQ8IW19 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.16■□□□□ 0.34
APLFQ8IW19 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
APLFQ8IW19 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
APLFQ8IW19 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
APLFQ8IW19 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APLFQ8IW19 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.16■□□□□ 0.34
APLFQ8IW19 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.16■□□□□ 0.34
APLFQ8IW19 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APLFQ8IW19 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.15■□□□□ 0.34
APLFQ8IW19 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APLFQ8IW19 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.15■□□□□ 0.34
APLFQ8IW19 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APLFQ8IW19 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
APLFQ8IW19 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APLFQ8IW19 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
APLFQ8IW19 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.15■□□□□ 0.34
APLFQ8IW19 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APLFQ8IW19 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APLFQ8IW19 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APLFQ8IW19 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
APLFQ8IW19 AP002469.2-201ENST00000531724 424 ntBASIC17.15■□□□□ 0.34
APLFQ8IW19 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.15■□□□□ 0.34
APLFQ8IW19 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
APLFQ8IW19 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.15■□□□□ 0.34
APLFQ8IW19 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
APLFQ8IW19 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.15■□□□□ 0.34
APLFQ8IW19 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
APLFQ8IW19 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
APLFQ8IW19 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
APLFQ8IW19 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APLFQ8IW19 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
APLFQ8IW19 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APLFQ8IW19 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
APLFQ8IW19 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
APLFQ8IW19 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.15■□□□□ 0.34
APLFQ8IW19 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APLFQ8IW19 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.14■□□□□ 0.33
APLFQ8IW19 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
APLFQ8IW19 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
APLFQ8IW19 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
APLFQ8IW19 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.14■□□□□ 0.33
APLFQ8IW19 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.14■□□□□ 0.33
APLFQ8IW19 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APLFQ8IW19 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APLFQ8IW19 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APLFQ8IW19 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms