Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
NPAS4Q8IUM7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 AC020763.4-201ENST00000623414 4170 ntBASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 BASP1P1-201ENST00000430708 665 ntBASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 AC055876.3-201ENST00000431496 288 ntBASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 KLF2P3-201ENST00000451977 1087 ntBASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 INGX-202ENST00000489074 768 ntBASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 LINC01225-203ENST00000563550 1244 ntBASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 AC138649.4-201ENST00000612222 287 ntBASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 AC012317.2-201ENST00000623305 2251 ntBASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NPAS4Q8IUM7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.33■□□□□ 0.53
NPAS4Q8IUM7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NPAS4Q8IUM7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.33■□□□□ 0.53
NPAS4Q8IUM7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
NPAS4Q8IUM7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.33■□□□□ 0.53
NPAS4Q8IUM7 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
NPAS4Q8IUM7 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NPAS4Q8IUM7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NPAS4Q8IUM7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NPAS4Q8IUM7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.33■□□□□ 0.53
NPAS4Q8IUM7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.53
NPAS4Q8IUM7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 HCG4-201ENST00000418983 998 ntBASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 SLC25A6P5-201ENST00000435663 894 ntBASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.33■□□□□ 0.52
NPAS4Q8IUM7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 AC133963.1-201ENST00000504166 1679 ntBASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NPAS4Q8IUM7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms