Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.23■□□□□ 0.35
LDB1Q86U70 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.23■□□□□ 0.35
LDB1Q86U70 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LDB1Q86U70 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LDB1Q86U70 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LDB1Q86U70 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
LDB1Q86U70 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LDB1Q86U70 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
LDB1Q86U70 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LDB1Q86U70 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDB1Q86U70 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.22■□□□□ 0.35
LDB1Q86U70 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.22■□□□□ 0.35
LDB1Q86U70 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.22■□□□□ 0.35
LDB1Q86U70 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.22■□□□□ 0.35
LDB1Q86U70 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDB1Q86U70 AL020989.1-201ENST00000422979 469 ntBASIC17.22■□□□□ 0.35
LDB1Q86U70 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.22■□□□□ 0.35
LDB1Q86U70 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LDB1Q86U70 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LDB1Q86U70 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.22■□□□□ 0.35
LDB1Q86U70 PRELID1P1-202ENST00000567272 903 ntBASIC17.22■□□□□ 0.35
LDB1Q86U70 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.22■□□□□ 0.35
LDB1Q86U70 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.22■□□□□ 0.35
LDB1Q86U70 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.22■□□□□ 0.35
LDB1Q86U70 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDB1Q86U70 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.22■□□□□ 0.35
LDB1Q86U70 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDB1Q86U70 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
LDB1Q86U70 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LDB1Q86U70 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDB1Q86U70 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDB1Q86U70 AC084018.2-201ENST00000613093 2607 ntBASIC17.22■□□□□ 0.35
LDB1Q86U70 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.22■□□□□ 0.35
LDB1Q86U70 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDB1Q86U70 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LDB1Q86U70 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
LDB1Q86U70 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.22■□□□□ 0.35
LDB1Q86U70 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDB1Q86U70 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDB1Q86U70 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.22■□□□□ 0.35
LDB1Q86U70 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDB1Q86U70 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LDB1Q86U70 AP005117.1-201ENST00000584346 1413 ntBASIC17.21■□□□□ 0.35
LDB1Q86U70 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
LDB1Q86U70 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.21■□□□□ 0.35
LDB1Q86U70 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LDB1Q86U70 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.21■□□□□ 0.35
LDB1Q86U70 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LDB1Q86U70 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LDB1Q86U70 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDB1Q86U70 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
LDB1Q86U70 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LDB1Q86U70 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LDB1Q86U70 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LDB1Q86U70 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDB1Q86U70 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
LDB1Q86U70 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.21■□□□□ 0.35
LDB1Q86U70 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDB1Q86U70 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
LDB1Q86U70 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.21■□□□□ 0.35
LDB1Q86U70 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDB1Q86U70 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.21■□□□□ 0.35
LDB1Q86U70 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
LDB1Q86U70 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LDB1Q86U70 BX005266.1-201ENST00000473402 457 ntBASIC17.21■□□□□ 0.35
LDB1Q86U70 KRT18P31-201ENST00000506277 1292 ntBASIC17.21■□□□□ 0.35
LDB1Q86U70 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.21■□□□□ 0.35
LDB1Q86U70 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LDB1Q86U70 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.21■□□□□ 0.35
LDB1Q86U70 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.21■□□□□ 0.35
LDB1Q86U70 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LDB1Q86U70 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.21■□□□□ 0.35
LDB1Q86U70 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDB1Q86U70 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LDB1Q86U70 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LDB1Q86U70 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.21■□□□□ 0.35
LDB1Q86U70 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LDB1Q86U70 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.34
LDB1Q86U70 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
LDB1Q86U70 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
LDB1Q86U70 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.2■□□□□ 0.34
LDB1Q86U70 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.2■□□□□ 0.34
LDB1Q86U70 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 AC079328.2-201ENST00000561241 3354 ntBASIC17.2■□□□□ 0.34
LDB1Q86U70 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.2■□□□□ 0.34
LDB1Q86U70 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.2■□□□□ 0.34
LDB1Q86U70 SIGLEC30P-201ENST00000455569 941 ntBASIC17.2■□□□□ 0.34
LDB1Q86U70 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LDB1Q86U70 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.2■□□□□ 0.34
LDB1Q86U70 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms