Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 AL024508.2-201ENST00000607749 1894 ntBASIC15.97■□□□□ 0.15
TUBA1AQ71U36 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.97■□□□□ 0.15
TUBA1AQ71U36 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 PTK2-216ENST00000519881 863 ntTSL 3 BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 AL136038.3-201ENST00000561909 1096 ntBASIC15.96■□□□□ 0.15
TUBA1AQ71U36 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 RNF126P1-202ENST00000569893 925 ntBASIC15.96■□□□□ 0.15
TUBA1AQ71U36 AC024563.2-201ENST00000603282 481 ntBASIC15.96■□□□□ 0.15
TUBA1AQ71U36 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 IER3-202ENST00000376377 1350 ntBASIC15.96■□□□□ 0.15
TUBA1AQ71U36 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TUBA1AQ71U36 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.96■□□□□ 0.14
TUBA1AQ71U36 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TUBA1AQ71U36 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
TUBA1AQ71U36 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TUBA1AQ71U36 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
TUBA1AQ71U36 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 MIR662-201ENST00000384847 95 ntBASIC15.95■□□□□ 0.14
TUBA1AQ71U36 KRT18P48-201ENST00000434763 852 ntBASIC15.95■□□□□ 0.14
TUBA1AQ71U36 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.95■□□□□ 0.14
TUBA1AQ71U36 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms