Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.21□□□□□ -0.14
VPS13CQ709C8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.21□□□□□ -0.14
VPS13CQ709C8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.21□□□□□ -0.14
VPS13CQ709C8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13CQ709C8 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VPS13CQ709C8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13CQ709C8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
VPS13CQ709C8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
VPS13CQ709C8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13CQ709C8 AL671277.1-201ENST00000429656 993 ntBASIC14.2□□□□□ -0.14
VPS13CQ709C8 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.2□□□□□ -0.14
VPS13CQ709C8 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.2□□□□□ -0.14
VPS13CQ709C8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13CQ709C8 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.2□□□□□ -0.14
VPS13CQ709C8 WASH6P-202ENST00000359512 1437 ntBASIC14.2□□□□□ -0.14
VPS13CQ709C8 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.2□□□□□ -0.14
VPS13CQ709C8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13CQ709C8 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.2□□□□□ -0.14
VPS13CQ709C8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.2□□□□□ -0.14
VPS13CQ709C8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13CQ709C8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13CQ709C8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13CQ709C8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.2□□□□□ -0.14
VPS13CQ709C8 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
VPS13CQ709C8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
VPS13CQ709C8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13CQ709C8 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13CQ709C8 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.2□□□□□ -0.14
VPS13CQ709C8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
VPS13CQ709C8 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VPS13CQ709C8 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.19□□□□□ -0.14
VPS13CQ709C8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13CQ709C8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13CQ709C8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.19□□□□□ -0.14
VPS13CQ709C8 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.19□□□□□ -0.14
VPS13CQ709C8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13CQ709C8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13CQ709C8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13CQ709C8 AL512384.1-201ENST00000406683 331 ntBASIC14.19□□□□□ -0.14
VPS13CQ709C8 GPR53P-205ENST00000457298 1084 ntBASIC14.19□□□□□ -0.14
VPS13CQ709C8 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.19□□□□□ -0.14
VPS13CQ709C8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.19□□□□□ -0.14
VPS13CQ709C8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13CQ709C8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13CQ709C8 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.19□□□□□ -0.14
VPS13CQ709C8 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13CQ709C8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
VPS13CQ709C8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.19□□□□□ -0.14
VPS13CQ709C8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13CQ709C8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13CQ709C8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13CQ709C8 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC14.19□□□□□ -0.14
VPS13CQ709C8 AC087163.2-201ENST00000457299 853 ntBASIC14.19□□□□□ -0.14
VPS13CQ709C8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.19□□□□□ -0.14
VPS13CQ709C8 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
VPS13CQ709C8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
VPS13CQ709C8 AC004790.1-201ENST00000612686 536 ntBASIC14.19□□□□□ -0.14
VPS13CQ709C8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC14.19□□□□□ -0.14
VPS13CQ709C8 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13CQ709C8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13CQ709C8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
VPS13CQ709C8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13CQ709C8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13CQ709C8 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13CQ709C8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.19□□□□□ -0.14
VPS13CQ709C8 TNXA-203ENST00000507684 2038 ntBASIC14.19□□□□□ -0.14
VPS13CQ709C8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13CQ709C8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.19□□□□□ -0.14
VPS13CQ709C8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13CQ709C8 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13CQ709C8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13CQ709C8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.19□□□□□ -0.14
VPS13CQ709C8 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.19□□□□□ -0.14
VPS13CQ709C8 MIR4525-201ENST00000580000 75 ntBASIC14.19□□□□□ -0.14
VPS13CQ709C8 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.19□□□□□ -0.14
VPS13CQ709C8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.19□□□□□ -0.14
VPS13CQ709C8 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
VPS13CQ709C8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC14.18□□□□□ -0.14
VPS13CQ709C8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.18□□□□□ -0.14
VPS13CQ709C8 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
VPS13CQ709C8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13CQ709C8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13CQ709C8 TMEM14DP-201ENST00000422205 345 ntBASIC14.18□□□□□ -0.14
VPS13CQ709C8 IGHV3-71-201ENST00000523324 359 ntBASIC14.18□□□□□ -0.14
VPS13CQ709C8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
VPS13CQ709C8 TP53TG3HP-202ENST00000569755 579 ntBASIC14.18□□□□□ -0.14
VPS13CQ709C8 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.18□□□□□ -0.14
VPS13CQ709C8 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
VPS13CQ709C8 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13CQ709C8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13CQ709C8 FOXO1B-201ENST00000504678 1527 ntBASIC14.18□□□□□ -0.14
VPS13CQ709C8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13CQ709C8 AC138969.3-201ENST00000546612 1459 ntBASIC14.18□□□□□ -0.14
VPS13CQ709C8 AC138932.2-201ENST00000548268 1459 ntBASIC14.18□□□□□ -0.14
VPS13CQ709C8 AC126755.4-201ENST00000549796 1459 ntBASIC14.18□□□□□ -0.14
VPS13CQ709C8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.18□□□□□ -0.14
VPS13CQ709C8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.18□□□□□ -0.14
VPS13CQ709C8 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
VPS13CQ709C8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.18□□□□□ -0.14
VPS13CQ709C8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms