Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 AC011498.5-201ENST00000592027 486 ntBASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 AC010240.3-201ENST00000607688 395 ntBASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 AC105917.1-201ENST00000506637 2539 ntBASIC19.9■□□□□ 0.78
PDZRN4Q6ZMN7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
PDZRN4Q6ZMN7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
PDZRN4Q6ZMN7 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 AL391807.1-203ENST00000604392 2365 ntBASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 NPAP1P7-201ENST00000613027 823 ntBASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC19.89■□□□□ 0.77
PDZRN4Q6ZMN7 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 BID-213ENST00000615414 2236 ntTSL 5 BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 DUSP5P1-201ENST00000441325 1139 ntBASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PDZRN4Q6ZMN7 AC034236.2-201ENST00000606662 1610 ntBASIC19.87■□□□□ 0.77
PDZRN4Q6ZMN7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN4Q6ZMN7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.87■□□□□ 0.77
PDZRN4Q6ZMN7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
PDZRN4Q6ZMN7 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PDZRN4Q6ZMN7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PDZRN4Q6ZMN7 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
PDZRN4Q6ZMN7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN4Q6ZMN7 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN4Q6ZMN7 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN4Q6ZMN7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN4Q6ZMN7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN4Q6ZMN7 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN4Q6ZMN7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN4Q6ZMN7 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PDZRN4Q6ZMN7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms