Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
C11orf88Q6PI97 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 AC034236.2-201ENST00000606662 1610 ntBASIC15.11■□□□□ 0.01
C11orf88Q6PI97 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 FAM8A6P-201ENST00000407496 1135 ntBASIC15.11■□□□□ 0.01
C11orf88Q6PI97 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 HOMER2P1-201ENST00000455653 964 ntBASIC15.11■□□□□ 0.01
C11orf88Q6PI97 AC092647.4-201ENST00000457211 535 ntBASIC15.11■□□□□ 0.01
C11orf88Q6PI97 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 AC091076.1-201ENST00000610741 619 ntBASIC15.11■□□□□ 0.01
C11orf88Q6PI97 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
C11orf88Q6PI97 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
C11orf88Q6PI97 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.09■□□□□ 0.01
C11orf88Q6PI97 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 AGGF1P2-201ENST00000426656 2106 ntBASIC15.09■□□□□ 0.01
C11orf88Q6PI97 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
C11orf88Q6PI97 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms