Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 AL121761.2-201ENST00000598007 1648 ntBASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 AC084018.2-201ENST00000613093 2607 ntBASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 BX005266.1-201ENST00000473402 457 ntBASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 AC093909.1-201ENST00000504731 1122 ntBASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 AP001005.1-201ENST00000571755 1248 ntBASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 AC025062.2-201ENST00000605477 670 ntBASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.99■□□□□ 0.47
TTC39BQ5VTQ0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 AL031284.1-201ENST00000419297 478 ntBASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 LAGE3P1-201ENST00000425356 484 ntBASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.98■□□□□ 0.47
TTC39BQ5VTQ0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 OR7E14P-202ENST00000530490 1290 ntBASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.97■□□□□ 0.47
TTC39BQ5VTQ0 AL139327.4-201ENST00000612362 153 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms