Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
RNFT1Q5M7Z0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RNFT1Q5M7Z0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
RNFT1Q5M7Z0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
RNFT1Q5M7Z0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.46■□□□□ 0.06
RNFT1Q5M7Z0 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 LETM1P2-201ENST00000597330 2178 ntBASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
RNFT1Q5M7Z0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 AL513210.1-201ENST00000629608 234 ntBASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 AC105339.1-204ENST00000636249 355 ntBASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
RNFT1Q5M7Z0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms