Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CDH17Q12864 GPR89P-201ENST00000407924 1495 ntBASIC17.44■□□□□ 0.38
CDH17Q12864 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH17Q12864 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CDH17Q12864 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH17Q12864 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH17Q12864 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH17Q12864 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH17Q12864 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH17Q12864 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH17Q12864 ACTG1P4-201ENST00000425123 1122 ntBASIC17.43■□□□□ 0.38
CDH17Q12864 UPK3BP1-201ENST00000428678 509 ntBASIC17.43■□□□□ 0.38
CDH17Q12864 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDH17Q12864 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
CDH17Q12864 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH17Q12864 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDH17Q12864 AC073592.4-201ENST00000623827 446 ntBASIC17.43■□□□□ 0.38
CDH17Q12864 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.43■□□□□ 0.38
CDH17Q12864 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH17Q12864 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH17Q12864 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH17Q12864 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH17Q12864 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH17Q12864 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH17Q12864 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH17Q12864 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CDH17Q12864 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.43■□□□□ 0.38
CDH17Q12864 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.43■□□□□ 0.38
CDH17Q12864 AC105020.1-201ENST00000435356 2205 ntBASIC17.43■□□□□ 0.38
CDH17Q12864 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CDH17Q12864 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CDH17Q12864 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH17Q12864 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CDH17Q12864 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.42■□□□□ 0.38
CDH17Q12864 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH17Q12864 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH17Q12864 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH17Q12864 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.42■□□□□ 0.38
CDH17Q12864 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH17Q12864 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
CDH17Q12864 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH17Q12864 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH17Q12864 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH17Q12864 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH17Q12864 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.42■□□□□ 0.38
CDH17Q12864 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH17Q12864 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.42■□□□□ 0.38
CDH17Q12864 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH17Q12864 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH17Q12864 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH17Q12864 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH17Q12864 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH17Q12864 AC079776.2-201ENST00000641154 1609 ntBASIC17.42■□□□□ 0.38
CDH17Q12864 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CDH17Q12864 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CDH17Q12864 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH17Q12864 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CDH17Q12864 AC005915.1-201ENST00000624912 2018 ntBASIC17.42■□□□□ 0.38
CDH17Q12864 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH17Q12864 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH17Q12864 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH17Q12864 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH17Q12864 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH17Q12864 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH17Q12864 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH17Q12864 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH17Q12864 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH17Q12864 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH17Q12864 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.41■□□□□ 0.38
CDH17Q12864 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
CDH17Q12864 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH17Q12864 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CDH17Q12864 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH17Q12864 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDH17Q12864 NUS1P1-201ENST00000446295 882 ntBASIC17.41■□□□□ 0.38
CDH17Q12864 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH17Q12864 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CDH17Q12864 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDH17Q12864 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.41■□□□□ 0.38
CDH17Q12864 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH17Q12864 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.41■□□□□ 0.38
CDH17Q12864 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.41■□□□□ 0.38
CDH17Q12864 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH17Q12864 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CDH17Q12864 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
CDH17Q12864 AC092068.3-201ENST00000587894 2016 ntBASIC17.41■□□□□ 0.38
CDH17Q12864 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH17Q12864 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH17Q12864 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH17Q12864 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH17Q12864 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.41■□□□□ 0.38
CDH17Q12864 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CDH17Q12864 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CDH17Q12864 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
CDH17Q12864 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH17Q12864 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.4■□□□□ 0.38
CDH17Q12864 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH17Q12864 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH17Q12864 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CDH17Q12864 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms