Protein–RNA interactions for Protein: Q12805

EFEMP1, EGF-containing fibulin-like extracellular matrix protein 1, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1Q12805 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EFEMP1Q12805 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
EFEMP1Q12805 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
EFEMP1Q12805 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EFEMP1Q12805 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EFEMP1Q12805 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
EFEMP1Q12805 MRPL20P1-201ENST00000400819 433 ntBASIC17.9■□□□□ 0.46
EFEMP1Q12805 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.9■□□□□ 0.46
EFEMP1Q12805 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.9■□□□□ 0.46
EFEMP1Q12805 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.9■□□□□ 0.46
EFEMP1Q12805 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.9■□□□□ 0.46
EFEMP1Q12805 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.9■□□□□ 0.46
EFEMP1Q12805 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
EFEMP1Q12805 AC064836.3-201ENST00000607928 673 ntBASIC17.9■□□□□ 0.46
EFEMP1Q12805 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC17.9■□□□□ 0.46
EFEMP1Q12805 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
EFEMP1Q12805 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
EFEMP1Q12805 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
EFEMP1Q12805 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.9■□□□□ 0.46
EFEMP1Q12805 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.9■□□□□ 0.46
EFEMP1Q12805 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
EFEMP1Q12805 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.9■□□□□ 0.46
EFEMP1Q12805 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.9■□□□□ 0.46
EFEMP1Q12805 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
EFEMP1Q12805 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
EFEMP1Q12805 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
EFEMP1Q12805 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.89■□□□□ 0.46
EFEMP1Q12805 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
EFEMP1Q12805 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.89■□□□□ 0.45
EFEMP1Q12805 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EFEMP1Q12805 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EFEMP1Q12805 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
EFEMP1Q12805 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFEMP1Q12805 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFEMP1Q12805 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
EFEMP1Q12805 CROCCP2-202ENST00000412962 2773 ntBASIC17.89■□□□□ 0.45
EFEMP1Q12805 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFEMP1Q12805 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
EFEMP1Q12805 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
EFEMP1Q12805 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.89■□□□□ 0.45
EFEMP1Q12805 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
EFEMP1Q12805 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
EFEMP1Q12805 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFEMP1Q12805 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
EFEMP1Q12805 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
EFEMP1Q12805 VN2R19P-201ENST00000442399 1052 ntBASIC17.89■□□□□ 0.45
EFEMP1Q12805 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.89■□□□□ 0.45
EFEMP1Q12805 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.89■□□□□ 0.45
EFEMP1Q12805 RNA5SP416-201ENST00000516838 111 ntBASIC17.89■□□□□ 0.45
EFEMP1Q12805 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.89■□□□□ 0.45
EFEMP1Q12805 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFEMP1Q12805 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
EFEMP1Q12805 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFEMP1Q12805 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
EFEMP1Q12805 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.89■□□□□ 0.45
EFEMP1Q12805 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFEMP1Q12805 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.89■□□□□ 0.45
EFEMP1Q12805 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
EFEMP1Q12805 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFEMP1Q12805 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.89■□□□□ 0.45
EFEMP1Q12805 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.89■□□□□ 0.45
EFEMP1Q12805 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFEMP1Q12805 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
EFEMP1Q12805 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFEMP1Q12805 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
EFEMP1Q12805 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
EFEMP1Q12805 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFEMP1Q12805 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.88■□□□□ 0.45
EFEMP1Q12805 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EFEMP1Q12805 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
EFEMP1Q12805 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFEMP1Q12805 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
EFEMP1Q12805 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFEMP1Q12805 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFEMP1Q12805 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.88■□□□□ 0.45
EFEMP1Q12805 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.88■□□□□ 0.45
EFEMP1Q12805 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFEMP1Q12805 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFEMP1Q12805 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.88■□□□□ 0.45
EFEMP1Q12805 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFEMP1Q12805 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFEMP1Q12805 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFEMP1Q12805 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
EFEMP1Q12805 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.88■□□□□ 0.45
EFEMP1Q12805 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.88■□□□□ 0.45
EFEMP1Q12805 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.88■□□□□ 0.45
EFEMP1Q12805 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFEMP1Q12805 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFEMP1Q12805 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
EFEMP1Q12805 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFEMP1Q12805 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.88■□□□□ 0.45
EFEMP1Q12805 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
EFEMP1Q12805 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFEMP1Q12805 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFEMP1Q12805 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
EFEMP1Q12805 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFEMP1Q12805 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
EFEMP1Q12805 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.88■□□□□ 0.45
EFEMP1Q12805 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
EFEMP1Q12805 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms