Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL16A1Q07092 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
COL16A1Q07092 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC22.87■■□□□ 1.25
COL16A1Q07092 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC22.87■■□□□ 1.25
COL16A1Q07092 RN7SL618P-201ENST00000477850 296 ntBASIC22.86■■□□□ 1.25
COL16A1Q07092 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC22.86■■□□□ 1.25
COL16A1Q07092 NEU3-203ENST00000529024 581 ntTSL 3 BASIC22.86■■□□□ 1.25
COL16A1Q07092 RAB35-202ENST00000534951 939 ntTSL 2 BASIC22.86■■□□□ 1.25
COL16A1Q07092 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC22.86■■□□□ 1.25
COL16A1Q07092 AL583810.1-201ENST00000553344 1045 ntBASIC22.86■■□□□ 1.25
COL16A1Q07092 RHOQP1-201ENST00000555758 579 ntBASIC22.86■■□□□ 1.25
COL16A1Q07092 RN7SL219P-201ENST00000582872 296 ntBASIC22.86■■□□□ 1.25
COL16A1Q07092 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC22.86■■□□□ 1.25
COL16A1Q07092 POR-209ENST00000439269 1858 ntTSL 2 BASIC22.86■■□□□ 1.25
COL16A1Q07092 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC22.86■■□□□ 1.25
COL16A1Q07092 REXO1L11P-201ENST00000620964 1927 ntBASIC22.86■■□□□ 1.25
COL16A1Q07092 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
COL16A1Q07092 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC22.86■■□□□ 1.25
COL16A1Q07092 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC22.86■■□□□ 1.25
COL16A1Q07092 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
COL16A1Q07092 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC22.86■■□□□ 1.25
COL16A1Q07092 PRYP6-201ENST00000514804 343 ntBASIC22.86■■□□□ 1.25
COL16A1Q07092 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC22.86■■□□□ 1.25
COL16A1Q07092 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL16A1Q07092 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL16A1Q07092 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL16A1Q07092 TUBB1P2-201ENST00000422712 1306 ntBASIC22.85■■□□□ 1.25
COL16A1Q07092 TUBB1P1-201ENST00000503144 1300 ntBASIC22.85■■□□□ 1.25
COL16A1Q07092 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL16A1Q07092 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
COL16A1Q07092 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL16A1Q07092 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC22.85■■□□□ 1.25
COL16A1Q07092 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC22.85■■□□□ 1.25
COL16A1Q07092 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC22.85■■□□□ 1.25
COL16A1Q07092 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL16A1Q07092 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC22.85■■□□□ 1.25
COL16A1Q07092 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
COL16A1Q07092 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC22.85■■□□□ 1.25
COL16A1Q07092 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
COL16A1Q07092 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC22.85■■□□□ 1.25
COL16A1Q07092 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC22.85■■□□□ 1.25
COL16A1Q07092 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC22.85■■□□□ 1.25
COL16A1Q07092 WFDC1-204ENST00000613603 549 ntBASIC22.85■■□□□ 1.25
COL16A1Q07092 RPS24-214ENST00000613865 538 ntTSL 5 BASIC22.85■■□□□ 1.25
COL16A1Q07092 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC22.85■■□□□ 1.25
COL16A1Q07092 5S_rRNA.22-201ENST00000614916 106 ntBASIC22.85■■□□□ 1.25
COL16A1Q07092 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC22.85■■□□□ 1.25
COL16A1Q07092 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC22.85■■□□□ 1.25
COL16A1Q07092 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
COL16A1Q07092 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
COL16A1Q07092 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
COL16A1Q07092 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
COL16A1Q07092 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC22.84■■□□□ 1.25
COL16A1Q07092 GOLGA2P4-201ENST00000441462 777 ntBASIC22.84■■□□□ 1.25
COL16A1Q07092 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC22.84■■□□□ 1.25
COL16A1Q07092 AC023310.3-201ENST00000557027 670 ntBASIC22.84■■□□□ 1.25
COL16A1Q07092 AC044860.1-202ENST00000559481 777 ntBASIC22.84■■□□□ 1.25
COL16A1Q07092 AC100756.1-201ENST00000562736 682 ntBASIC22.84■■□□□ 1.25
COL16A1Q07092 AC138749.3-201ENST00000567691 622 ntBASIC22.84■■□□□ 1.25
COL16A1Q07092 AC116165.1-201ENST00000611806 668 ntBASIC22.84■■□□□ 1.25
COL16A1Q07092 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
COL16A1Q07092 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL16A1Q07092 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
COL16A1Q07092 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
COL16A1Q07092 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL16A1Q07092 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
COL16A1Q07092 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
COL16A1Q07092 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
COL16A1Q07092 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
COL16A1Q07092 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC22.83■■□□□ 1.25
COL16A1Q07092 AC108725.1-201ENST00000495472 409 ntBASIC22.83■■□□□ 1.25
COL16A1Q07092 RNA5SP423-201ENST00000517127 109 ntBASIC22.83■■□□□ 1.25
COL16A1Q07092 AC123567.1-201ENST00000548294 1261 ntBASIC22.83■■□□□ 1.25
COL16A1Q07092 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC22.83■■□□□ 1.25
COL16A1Q07092 WT1-AS_2.1-201ENST00000613208 137 ntBASIC22.83■■□□□ 1.25
COL16A1Q07092 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL16A1Q07092 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL16A1Q07092 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL16A1Q07092 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
COL16A1Q07092 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
COL16A1Q07092 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
COL16A1Q07092 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
COL16A1Q07092 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
COL16A1Q07092 ELK2AP-201ENST00000392510 1007 ntBASIC22.82■■□□□ 1.24
COL16A1Q07092 MYCLP2-201ENST00000449268 967 ntBASIC22.82■■□□□ 1.24
COL16A1Q07092 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC22.82■■□□□ 1.24
COL16A1Q07092 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
COL16A1Q07092 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
COL16A1Q07092 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC22.82■■□□□ 1.24
COL16A1Q07092 AC015936.2-201ENST00000593177 259 ntBASIC22.82■■□□□ 1.24
COL16A1Q07092 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
COL16A1Q07092 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL16A1Q07092 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL16A1Q07092 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
COL16A1Q07092 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC22.82■■□□□ 1.24
COL16A1Q07092 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC22.82■■□□□ 1.24
COL16A1Q07092 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
COL16A1Q07092 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC22.82■■□□□ 1.24
COL16A1Q07092 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC22.82■■□□□ 1.24
COL16A1Q07092 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms