Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CL1P78423 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CL1P78423 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CL1P78423 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CX3CL1P78423 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CL1P78423 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CL1P78423 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CL1P78423 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CX3CL1P78423 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CL1P78423 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CL1P78423 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
CX3CL1P78423 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CL1P78423 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CL1P78423 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.94□□□□□ -0.18
CX3CL1P78423 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.94□□□□□ -0.18
CX3CL1P78423 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.94□□□□□ -0.18
CX3CL1P78423 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.94□□□□□ -0.18
CX3CL1P78423 AC111152.3-201ENST00000569699 673 ntBASIC13.94□□□□□ -0.18
CX3CL1P78423 AC019129.2-201ENST00000609837 1235 ntBASIC13.94□□□□□ -0.18
CX3CL1P78423 AC114341.1-201ENST00000618070 349 ntBASIC13.94□□□□□ -0.18
CX3CL1P78423 CCNC-219ENST00000627680 896 ntTSL 5 BASIC13.94□□□□□ -0.18
CX3CL1P78423 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CL1P78423 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
CX3CL1P78423 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.94□□□□□ -0.18
CX3CL1P78423 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CL1P78423 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
CX3CL1P78423 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CL1P78423 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CL1P78423 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
CX3CL1P78423 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
CX3CL1P78423 INTS4P1-201ENST00000438455 1935 ntBASIC13.94□□□□□ -0.18
CX3CL1P78423 PKD1P5-201ENST00000532415 10291 ntBASIC13.94□□□□□ -0.18
CX3CL1P78423 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CL1P78423 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CX3CL1P78423 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CX3CL1P78423 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CL1P78423 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
CX3CL1P78423 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.93□□□□□ -0.18
CX3CL1P78423 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CL1P78423 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CL1P78423 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CL1P78423 AL049757.1-201ENST00000616842 1596 ntBASIC13.93□□□□□ -0.18
CX3CL1P78423 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC13.93□□□□□ -0.18
CX3CL1P78423 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CL1P78423 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CL1P78423 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CL1P78423 MYCLP1-201ENST00000372451 1075 ntBASIC13.93□□□□□ -0.18
CX3CL1P78423 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CL1P78423 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.93□□□□□ -0.18
CX3CL1P78423 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.93□□□□□ -0.18
CX3CL1P78423 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CL1P78423 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
CX3CL1P78423 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
CX3CL1P78423 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CL1P78423 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.93□□□□□ -0.18
CX3CL1P78423 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.93□□□□□ -0.18
CX3CL1P78423 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CL1P78423 AC138894.3-201ENST00000603787 634 ntBASIC13.93□□□□□ -0.18
CX3CL1P78423 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
CX3CL1P78423 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.93□□□□□ -0.18
CX3CL1P78423 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC13.93□□□□□ -0.18
CX3CL1P78423 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CL1P78423 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CL1P78423 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.93□□□□□ -0.18
CX3CL1P78423 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CL1P78423 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.93□□□□□ -0.18
CX3CL1P78423 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.93□□□□□ -0.18
CX3CL1P78423 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CL1P78423 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CL1P78423 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CL1P78423 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CL1P78423 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CL1P78423 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CX3CL1P78423 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CX3CL1P78423 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CX3CL1P78423 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.92□□□□□ -0.18
CX3CL1P78423 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC13.92□□□□□ -0.18
CX3CL1P78423 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CX3CL1P78423 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CX3CL1P78423 NUS1P2-201ENST00000417358 873 ntBASIC13.92□□□□□ -0.18
CX3CL1P78423 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.92□□□□□ -0.18
CX3CL1P78423 THAP5-204ENST00000438865 868 ntTSL 2 BASIC13.92□□□□□ -0.18
CX3CL1P78423 NUS1P1-201ENST00000446295 882 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms