Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 STK19B-204ENST00000512515 211 ntBASIC16.82■□□□□ 0.28
YBX1P67809 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
YBX1P67809 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.82■□□□□ 0.28
YBX1P67809 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.82■□□□□ 0.28
YBX1P67809 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.82■□□□□ 0.28
YBX1P67809 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.82■□□□□ 0.28
YBX1P67809 AL121912.1-201ENST00000603683 238 ntBASIC16.82■□□□□ 0.28
YBX1P67809 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.82■□□□□ 0.28
YBX1P67809 AC148477.8-201ENST00000624298 468 ntBASIC16.82■□□□□ 0.28
YBX1P67809 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
YBX1P67809 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
YBX1P67809 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
YBX1P67809 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
YBX1P67809 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
YBX1P67809 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
YBX1P67809 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
YBX1P67809 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
YBX1P67809 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
YBX1P67809 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
YBX1P67809 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
YBX1P67809 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
YBX1P67809 AC009336.1-201ENST00000608941 1553 ntBASIC16.81■□□□□ 0.28
YBX1P67809 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YBX1P67809 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
YBX1P67809 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.81■□□□□ 0.28
YBX1P67809 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
YBX1P67809 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
YBX1P67809 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
YBX1P67809 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YBX1P67809 KLF4P1-201ENST00000412782 1185 ntBASIC16.81■□□□□ 0.28
YBX1P67809 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.81■□□□□ 0.28
YBX1P67809 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.81■□□□□ 0.28
YBX1P67809 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.81■□□□□ 0.28
YBX1P67809 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
YBX1P67809 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.81■□□□□ 0.28
YBX1P67809 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
YBX1P67809 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YBX1P67809 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
YBX1P67809 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
YBX1P67809 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YBX1P67809 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
YBX1P67809 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
YBX1P67809 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
YBX1P67809 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.81■□□□□ 0.28
YBX1P67809 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YBX1P67809 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YBX1P67809 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YBX1P67809 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
YBX1P67809 HTR7P1-202ENST00000624664 4411 ntBASIC16.81■□□□□ 0.28
YBX1P67809 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
YBX1P67809 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
YBX1P67809 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.81■□□□□ 0.28
YBX1P67809 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.8■□□□□ 0.28
YBX1P67809 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.8■□□□□ 0.28
YBX1P67809 AL139384.1-201ENST00000612143 3047 ntBASIC16.8■□□□□ 0.28
YBX1P67809 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.8■□□□□ 0.28
YBX1P67809 AL356309.3-201ENST00000624132 1934 ntBASIC16.8■□□□□ 0.28
YBX1P67809 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
YBX1P67809 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
YBX1P67809 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YBX1P67809 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YBX1P67809 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
YBX1P67809 AC046185.3-201ENST00000623228 1824 ntBASIC16.8■□□□□ 0.28
YBX1P67809 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YBX1P67809 CICP6-201ENST00000457191 2729 ntBASIC16.8■□□□□ 0.28
YBX1P67809 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YBX1P67809 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
YBX1P67809 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
YBX1P67809 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
YBX1P67809 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YBX1P67809 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YBX1P67809 AC004870.1-201ENST00000315132 882 ntBASIC16.8■□□□□ 0.28
YBX1P67809 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YBX1P67809 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YBX1P67809 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
YBX1P67809 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.8■□□□□ 0.28
YBX1P67809 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
YBX1P67809 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
YBX1P67809 AC009078.2-202ENST00000463353 338 ntBASIC16.8■□□□□ 0.28
YBX1P67809 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.8■□□□□ 0.28
YBX1P67809 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.8■□□□□ 0.28
YBX1P67809 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
YBX1P67809 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
YBX1P67809 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
YBX1P67809 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
YBX1P67809 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.8■□□□□ 0.28
YBX1P67809 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
YBX1P67809 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
YBX1P67809 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
YBX1P67809 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
YBX1P67809 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YBX1P67809 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
YBX1P67809 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.79■□□□□ 0.28
YBX1P67809 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
YBX1P67809 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
YBX1P67809 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.79■□□□□ 0.28
YBX1P67809 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
YBX1P67809 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
YBX1P67809 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.79■□□□□ 0.28
YBX1P67809 AC003669.1-201ENST00000334569 611 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms