Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.26■□□□□ 0.19
TRA2BP62995 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRA2BP62995 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.26■□□□□ 0.19
TRA2BP62995 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
TRA2BP62995 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.26■□□□□ 0.19
TRA2BP62995 AC008608.2-201ENST00000606089 416 ntBASIC16.26■□□□□ 0.19
TRA2BP62995 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.26■□□□□ 0.19
TRA2BP62995 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRA2BP62995 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRA2BP62995 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRA2BP62995 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRA2BP62995 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRA2BP62995 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TRA2BP62995 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.26■□□□□ 0.19
TRA2BP62995 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRA2BP62995 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRA2BP62995 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.26■□□□□ 0.19
TRA2BP62995 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRA2BP62995 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRA2BP62995 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRA2BP62995 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.25■□□□□ 0.19
TRA2BP62995 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRA2BP62995 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRA2BP62995 TUBB8P12-201ENST00000308911 1335 ntBASIC16.25■□□□□ 0.19
TRA2BP62995 TUBB7P-202ENST00000428444 1305 ntBASIC16.25■□□□□ 0.19
TRA2BP62995 TUBB8P7-204ENST00000567960 1332 ntBASIC16.25■□□□□ 0.19
TRA2BP62995 AL590787.1-201ENST00000568856 1315 ntBASIC16.25■□□□□ 0.19
TRA2BP62995 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRA2BP62995 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRA2BP62995 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.25■□□□□ 0.19
TRA2BP62995 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRA2BP62995 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRA2BP62995 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRA2BP62995 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRA2BP62995 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRA2BP62995 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.25■□□□□ 0.19
TRA2BP62995 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRA2BP62995 AP002414.1-201ENST00000391405 1147 ntBASIC16.25■□□□□ 0.19
TRA2BP62995 SAPCD2P3-201ENST00000455031 850 ntBASIC16.25■□□□□ 0.19
TRA2BP62995 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRA2BP62995 AP002490.2-201ENST00000524791 560 ntBASIC16.25■□□□□ 0.19
TRA2BP62995 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.25■□□□□ 0.19
TRA2BP62995 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.25■□□□□ 0.19
TRA2BP62995 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.25■□□□□ 0.19
TRA2BP62995 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRA2BP62995 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRA2BP62995 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRA2BP62995 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRA2BP62995 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRA2BP62995 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
TRA2BP62995 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRA2BP62995 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRA2BP62995 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRA2BP62995 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TRA2BP62995 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.25■□□□□ 0.19
TRA2BP62995 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TRA2BP62995 AC105020.1-201ENST00000435356 2205 ntBASIC16.25■□□□□ 0.19
TRA2BP62995 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRA2BP62995 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRA2BP62995 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TRA2BP62995 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.24■□□□□ 0.19
TRA2BP62995 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRA2BP62995 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRA2BP62995 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRA2BP62995 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRA2BP62995 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRA2BP62995 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRA2BP62995 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRA2BP62995 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.24■□□□□ 0.19
TRA2BP62995 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
TRA2BP62995 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.24■□□□□ 0.19
TRA2BP62995 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.24■□□□□ 0.19
TRA2BP62995 CLEC4GP1-201ENST00000596555 870 ntBASIC16.24■□□□□ 0.19
TRA2BP62995 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.24■□□□□ 0.19
TRA2BP62995 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRA2BP62995 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.24■□□□□ 0.19
TRA2BP62995 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRA2BP62995 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRA2BP62995 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRA2BP62995 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRA2BP62995 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRA2BP62995 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRA2BP62995 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRA2BP62995 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRA2BP62995 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRA2BP62995 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.24■□□□□ 0.19
TRA2BP62995 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRA2BP62995 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRA2BP62995 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRA2BP62995 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.23■□□□□ 0.19
TRA2BP62995 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRA2BP62995 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TRA2BP62995 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRA2BP62995 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRA2BP62995 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.23■□□□□ 0.19
TRA2BP62995 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRA2BP62995 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TRA2BP62995 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRA2BP62995 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRA2BP62995 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms