Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
UBA52P62987 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
UBA52P62987 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBA52P62987 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.95□□□□□ -0.02
UBA52P62987 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.95□□□□□ -0.02
UBA52P62987 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
UBA52P62987 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
UBA52P62987 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBA52P62987 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBA52P62987 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
UBA52P62987 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
UBA52P62987 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.95□□□□□ -0.02
UBA52P62987 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.95□□□□□ -0.02
UBA52P62987 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBA52P62987 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBA52P62987 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBA52P62987 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBA52P62987 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBA52P62987 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
UBA52P62987 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBA52P62987 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBA52P62987 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBA52P62987 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
UBA52P62987 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBA52P62987 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.95□□□□□ -0.02
UBA52P62987 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBA52P62987 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.95□□□□□ -0.02
UBA52P62987 MIR662-201ENST00000384847 95 ntBASIC14.95□□□□□ -0.02
UBA52P62987 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.95□□□□□ -0.02
UBA52P62987 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
UBA52P62987 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.95□□□□□ -0.02
UBA52P62987 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBA52P62987 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.95□□□□□ -0.02
UBA52P62987 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
UBA52P62987 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.95□□□□□ -0.02
UBA52P62987 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBA52P62987 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.95□□□□□ -0.02
UBA52P62987 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBA52P62987 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBA52P62987 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBA52P62987 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.95□□□□□ -0.02
UBA52P62987 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.95□□□□□ -0.02
UBA52P62987 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.95□□□□□ -0.02
UBA52P62987 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.95□□□□□ -0.02
UBA52P62987 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBA52P62987 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
UBA52P62987 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
UBA52P62987 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.95□□□□□ -0.02
UBA52P62987 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.95□□□□□ -0.02
UBA52P62987 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBA52P62987 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBA52P62987 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
UBA52P62987 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.94□□□□□ -0.02
UBA52P62987 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.94□□□□□ -0.02
UBA52P62987 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.94□□□□□ -0.02
UBA52P62987 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC14.94□□□□□ -0.02
UBA52P62987 KRT8P3-201ENST00000519669 1449 ntBASIC14.94□□□□□ -0.02
UBA52P62987 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
UBA52P62987 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.94□□□□□ -0.02
UBA52P62987 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.94□□□□□ -0.02
UBA52P62987 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 PVRIG2P-201ENST00000435460 978 ntBASIC14.94□□□□□ -0.02
UBA52P62987 LINC00265-3P-201ENST00000447588 903 ntBASIC14.94□□□□□ -0.02
UBA52P62987 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
UBA52P62987 AP000867.3-201ENST00000524675 377 ntBASIC14.94□□□□□ -0.02
UBA52P62987 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 LINC01711-201ENST00000598340 967 ntBASIC14.94□□□□□ -0.02
UBA52P62987 AL121772.3-201ENST00000610840 674 ntBASIC14.94□□□□□ -0.02
UBA52P62987 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC14.94□□□□□ -0.02
UBA52P62987 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
UBA52P62987 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.94□□□□□ -0.02
UBA52P62987 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
UBA52P62987 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
UBA52P62987 LINC02199-201ENST00000506655 2702 ntBASIC14.94□□□□□ -0.02
UBA52P62987 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBA52P62987 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBA52P62987 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
UBA52P62987 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.93□□□□□ -0.02
UBA52P62987 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms