Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
EPHB4P54760 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EPHB4P54760 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHB4P54760 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EPHB4P54760 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
EPHB4P54760 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.38■□□□□ 0.69
EPHB4P54760 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB4P54760 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB4P54760 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB4P54760 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB4P54760 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
EPHB4P54760 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB4P54760 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB4P54760 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB4P54760 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB4P54760 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB4P54760 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB4P54760 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB4P54760 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB4P54760 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
EPHB4P54760 AC010460.3-201ENST00000511359 1579 ntBASIC19.38■□□□□ 0.69
EPHB4P54760 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC19.38■□□□□ 0.69
EPHB4P54760 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB4P54760 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.38■□□□□ 0.69
EPHB4P54760 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
EPHB4P54760 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.38■□□□□ 0.69
EPHB4P54760 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.38■□□□□ 0.69
EPHB4P54760 AC138761.1-201ENST00000584393 385 ntBASIC19.38■□□□□ 0.69
EPHB4P54760 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.38■□□□□ 0.69
EPHB4P54760 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.38■□□□□ 0.69
EPHB4P54760 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.38■□□□□ 0.69
EPHB4P54760 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
EPHB4P54760 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
EPHB4P54760 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
EPHB4P54760 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.37■□□□□ 0.69
EPHB4P54760 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
EPHB4P54760 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
EPHB4P54760 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.37■□□□□ 0.69
EPHB4P54760 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
EPHB4P54760 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
EPHB4P54760 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB4P54760 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB4P54760 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB4P54760 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.37■□□□□ 0.69
EPHB4P54760 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB4P54760 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
EPHB4P54760 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB4P54760 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB4P54760 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB4P54760 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.37■□□□□ 0.69
EPHB4P54760 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB4P54760 IGHV3-65-201ENST00000523210 341 ntBASIC19.37■□□□□ 0.69
EPHB4P54760 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB4P54760 CCND1-203ENST00000536559 553 ntTSL 3 BASIC19.37■□□□□ 0.69
EPHB4P54760 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.37■□□□□ 0.69
EPHB4P54760 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
EPHB4P54760 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.37■□□□□ 0.69
EPHB4P54760 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
EPHB4P54760 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB4P54760 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.37■□□□□ 0.69
EPHB4P54760 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB4P54760 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
EPHB4P54760 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB4P54760 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
EPHB4P54760 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB4P54760 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB4P54760 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
EPHB4P54760 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EPHB4P54760 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EPHB4P54760 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EPHB4P54760 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
EPHB4P54760 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.36■□□□□ 0.69
EPHB4P54760 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.36■□□□□ 0.69
EPHB4P54760 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EPHB4P54760 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EPHB4P54760 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EPHB4P54760 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
EPHB4P54760 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EPHB4P54760 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
EPHB4P54760 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EPHB4P54760 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EPHB4P54760 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EPHB4P54760 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.36■□□□□ 0.69
EPHB4P54760 AC092474.2-201ENST00000424288 719 ntBASIC19.36■□□□□ 0.69
EPHB4P54760 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.36■□□□□ 0.69
EPHB4P54760 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EPHB4P54760 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.36■□□□□ 0.69
EPHB4P54760 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.36■□□□□ 0.69
EPHB4P54760 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.36■□□□□ 0.69
EPHB4P54760 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.36■□□□□ 0.69
EPHB4P54760 AC005498.2-205ENST00000593218 784 ntBASIC19.36■□□□□ 0.69
EPHB4P54760 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
EPHB4P54760 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.36■□□□□ 0.69
EPHB4P54760 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
EPHB4P54760 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EPHB4P54760 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EPHB4P54760 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
EPHB4P54760 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EPHB4P54760 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
EPHB4P54760 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms