Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
HLCSP50747 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.53■□□□□ 0.24
HLCSP50747 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLCSP50747 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.53■□□□□ 0.24
HLCSP50747 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
HLCSP50747 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.53■□□□□ 0.24
HLCSP50747 AC005336.2-201ENST00000593183 939 ntBASIC16.53■□□□□ 0.24
HLCSP50747 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLCSP50747 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
HLCSP50747 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLCSP50747 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLCSP50747 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HLCSP50747 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLCSP50747 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLCSP50747 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.53■□□□□ 0.24
HLCSP50747 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLCSP50747 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLCSP50747 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.53■□□□□ 0.24
HLCSP50747 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLCSP50747 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HLCSP50747 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLCSP50747 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLCSP50747 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HLCSP50747 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLCSP50747 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
HLCSP50747 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HLCSP50747 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HLCSP50747 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLCSP50747 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLCSP50747 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLCSP50747 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLCSP50747 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.52■□□□□ 0.24
HLCSP50747 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
HLCSP50747 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLCSP50747 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLCSP50747 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HLCSP50747 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLCSP50747 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLCSP50747 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLCSP50747 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.52■□□□□ 0.24
HLCSP50747 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HLCSP50747 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.52■□□□□ 0.24
HLCSP50747 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLCSP50747 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HLCSP50747 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HLCSP50747 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
HLCSP50747 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HLCSP50747 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HLCSP50747 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.52■□□□□ 0.24
HLCSP50747 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.52■□□□□ 0.24
HLCSP50747 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.52■□□□□ 0.24
HLCSP50747 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HLCSP50747 AC096582.2-201ENST00000510860 516 ntBASIC16.52■□□□□ 0.24
HLCSP50747 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.52■□□□□ 0.24
HLCSP50747 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.52■□□□□ 0.24
HLCSP50747 MIR5100-201ENST00000579544 119 ntBASIC16.52■□□□□ 0.24
HLCSP50747 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HLCSP50747 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.52■□□□□ 0.24
HLCSP50747 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
HLCSP50747 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.52■□□□□ 0.24
HLCSP50747 AL591684.3-201ENST00000605187 298 ntBASIC16.52■□□□□ 0.24
HLCSP50747 AC114341.1-201ENST00000618070 349 ntBASIC16.52■□□□□ 0.24
HLCSP50747 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.52■□□□□ 0.23
HLCSP50747 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.52■□□□□ 0.23
HLCSP50747 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLCSP50747 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
HLCSP50747 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLCSP50747 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HLCSP50747 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.52■□□□□ 0.23
HLCSP50747 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.52■□□□□ 0.23
HLCSP50747 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLCSP50747 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
HLCSP50747 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
HLCSP50747 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLCSP50747 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.51■□□□□ 0.23
HLCSP50747 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLCSP50747 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.51■□□□□ 0.23
HLCSP50747 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.51■□□□□ 0.23
HLCSP50747 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLCSP50747 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HLCSP50747 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.51■□□□□ 0.23
HLCSP50747 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
HLCSP50747 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLCSP50747 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLCSP50747 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLCSP50747 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLCSP50747 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLCSP50747 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLCSP50747 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLCSP50747 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLCSP50747 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HLCSP50747 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.51■□□□□ 0.23
HLCSP50747 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.51■□□□□ 0.23
HLCSP50747 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.51■□□□□ 0.23
HLCSP50747 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.51■□□□□ 0.23
HLCSP50747 AC112698.1-201ENST00000510299 916 ntBASIC16.51■□□□□ 0.23
HLCSP50747 AC009533.2-201ENST00000543664 586 ntBASIC16.51■□□□□ 0.23
HLCSP50747 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.51■□□□□ 0.23
HLCSP50747 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HLCSP50747 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms