Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPT1AP50416 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.98■□□□□ 0.63
CPT1AP50416 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CPT1AP50416 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPT1AP50416 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPT1AP50416 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPT1AP50416 AC133963.1-201ENST00000504166 1679 ntBASIC18.98■□□□□ 0.63
CPT1AP50416 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPT1AP50416 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPT1AP50416 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
CPT1AP50416 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.98■□□□□ 0.63
CPT1AP50416 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CPT1AP50416 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPT1AP50416 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CPT1AP50416 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPT1AP50416 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPT1AP50416 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPT1AP50416 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CPT1AP50416 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPT1AP50416 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPT1AP50416 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPT1AP50416 AC109635.5-201ENST00000533593 962 ntBASIC18.97■□□□□ 0.63
CPT1AP50416 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.97■□□□□ 0.63
CPT1AP50416 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.97■□□□□ 0.63
CPT1AP50416 AP001059.3-201ENST00000619053 235 ntBASIC18.97■□□□□ 0.63
CPT1AP50416 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPT1AP50416 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CPT1AP50416 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
CPT1AP50416 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPT1AP50416 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPT1AP50416 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPT1AP50416 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
CPT1AP50416 AC138932.1-201ENST00000534164 6830 ntBASIC18.97■□□□□ 0.63
CPT1AP50416 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CPT1AP50416 AC012317.2-201ENST00000623305 2251 ntBASIC18.97■□□□□ 0.63
CPT1AP50416 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CPT1AP50416 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPT1AP50416 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.96■□□□□ 0.63
CPT1AP50416 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.96■□□□□ 0.63
CPT1AP50416 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CPT1AP50416 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPT1AP50416 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.96■□□□□ 0.63
CPT1AP50416 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CPT1AP50416 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
CPT1AP50416 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.96■□□□□ 0.63
CPT1AP50416 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPT1AP50416 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CPT1AP50416 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPT1AP50416 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
CPT1AP50416 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.96■□□□□ 0.63
CPT1AP50416 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPT1AP50416 HCG4-201ENST00000418983 998 ntBASIC18.96■□□□□ 0.63
CPT1AP50416 FAM58DP-201ENST00000428076 619 ntBASIC18.96■□□□□ 0.63
CPT1AP50416 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPT1AP50416 SPCS2P4-201ENST00000436160 681 ntBASIC18.96■□□□□ 0.63
CPT1AP50416 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPT1AP50416 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPT1AP50416 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPT1AP50416 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPT1AP50416 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.96■□□□□ 0.63
CPT1AP50416 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.96■□□□□ 0.63
CPT1AP50416 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.96■□□□□ 0.63
CPT1AP50416 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPT1AP50416 DUX4L27-201ENST00000554796 1261 ntBASIC18.96■□□□□ 0.63
CPT1AP50416 KRT8P23-201ENST00000560090 1207 ntBASIC18.96■□□□□ 0.63
CPT1AP50416 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPT1AP50416 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.96■□□□□ 0.63
CPT1AP50416 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.96■□□□□ 0.63
CPT1AP50416 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.96■□□□□ 0.63
CPT1AP50416 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CPT1AP50416 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPT1AP50416 AL355312.1-201ENST00000407115 2176 ntBASIC18.96■□□□□ 0.63
CPT1AP50416 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPT1AP50416 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.96■□□□□ 0.63
CPT1AP50416 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CPT1AP50416 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CPT1AP50416 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPT1AP50416 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CPT1AP50416 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPT1AP50416 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.95■□□□□ 0.62
CPT1AP50416 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
CPT1AP50416 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPT1AP50416 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPT1AP50416 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.95■□□□□ 0.62
CPT1AP50416 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPT1AP50416 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.95■□□□□ 0.62
CPT1AP50416 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPT1AP50416 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPT1AP50416 COX20P2-201ENST00000452636 358 ntBASIC18.95■□□□□ 0.62
CPT1AP50416 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.95■□□□□ 0.62
CPT1AP50416 AC093214.1-201ENST00000511688 1107 ntBASIC18.95■□□□□ 0.62
CPT1AP50416 AC069262.1-201ENST00000539058 672 ntBASIC18.95■□□□□ 0.62
CPT1AP50416 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.95■□□□□ 0.62
CPT1AP50416 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.95■□□□□ 0.62
CPT1AP50416 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.95■□□□□ 0.62
CPT1AP50416 AC051619.7-201ENST00000568314 623 ntBASIC18.95■□□□□ 0.62
CPT1AP50416 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.95■□□□□ 0.62
CPT1AP50416 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CPT1AP50416 AJ011932.1-201ENST00000621707 465 ntBASIC18.95■□□□□ 0.62
CPT1AP50416 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms