Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CDC34P49427 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CDC34P49427 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.68□□□□□ -0.22
CDC34P49427 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC34P49427 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC34P49427 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC34P49427 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CDC34P49427 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC34P49427 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CDC34P49427 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CDC34P49427 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
CDC34P49427 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.67□□□□□ -0.22
CDC34P49427 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.67□□□□□ -0.22
CDC34P49427 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.67□□□□□ -0.22
CDC34P49427 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 AC103702.1-201ENST00000548801 2630 ntBASIC13.67□□□□□ -0.22
CDC34P49427 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 AC067930.6-201ENST00000623257 4947 ntBASIC13.67□□□□□ -0.22
CDC34P49427 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CDC34P49427 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.67□□□□□ -0.22
CDC34P49427 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.67□□□□□ -0.22
CDC34P49427 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CDC34P49427 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC13.67□□□□□ -0.22
CDC34P49427 AC116562.2-201ENST00000507042 360 ntBASIC13.67□□□□□ -0.22
CDC34P49427 TK2-204ENST00000525974 1178 ntTSL 2 BASIC13.67□□□□□ -0.22
CDC34P49427 C1QBPP2-201ENST00000528754 825 ntBASIC13.67□□□□□ -0.22
CDC34P49427 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.67□□□□□ -0.22
CDC34P49427 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.67□□□□□ -0.22
CDC34P49427 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.67□□□□□ -0.22
CDC34P49427 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CDC34P49427 GRAMD4P8-201ENST00000605465 1115 ntBASIC13.67□□□□□ -0.22
CDC34P49427 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CDC34P49427 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CDC34P49427 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.67□□□□□ -0.22
CDC34P49427 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CDC34P49427 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC13.67□□□□□ -0.22
CDC34P49427 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
CDC34P49427 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CDC34P49427 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.67□□□□□ -0.22
CDC34P49427 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CDC34P49427 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.66□□□□□ -0.22
CDC34P49427 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CDC34P49427 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
CDC34P49427 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.66□□□□□ -0.22
CDC34P49427 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CDC34P49427 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC13.66□□□□□ -0.22
CDC34P49427 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC13.66□□□□□ -0.22
CDC34P49427 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC13.66□□□□□ -0.22
CDC34P49427 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 ESRRAP1-201ENST00000400596 1257 ntBASIC13.66□□□□□ -0.22
CDC34P49427 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.66□□□□□ -0.22
CDC34P49427 TSPY17P-201ENST00000450329 467 ntBASIC13.66□□□□□ -0.22
CDC34P49427 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC13.66□□□□□ -0.22
CDC34P49427 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13.66□□□□□ -0.22
CDC34P49427 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
CDC34P49427 AC113404.2-201ENST00000507884 177 ntBASIC13.66□□□□□ -0.22
CDC34P49427 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC13.66□□□□□ -0.22
CDC34P49427 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
CDC34P49427 CD177P1-201ENST00000606252 935 ntBASIC13.66□□□□□ -0.22
CDC34P49427 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDC34P49427 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms