Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 LETM1P2-201ENST00000597330 2178 ntBASIC17.23■□□□□ 0.35
CSNK1DP48730 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1DP48730 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CSNK1DP48730 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1DP48730 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CSNK1DP48730 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CSNK1DP48730 FZD10-202ENST00000539839 3282 ntBASIC17.23■□□□□ 0.35
CSNK1DP48730 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1DP48730 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
CSNK1DP48730 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1DP48730 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CSNK1DP48730 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
CSNK1DP48730 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1DP48730 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.22■□□□□ 0.35
CSNK1DP48730 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.22■□□□□ 0.35
CSNK1DP48730 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.22■□□□□ 0.35
CSNK1DP48730 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1DP48730 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1DP48730 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1DP48730 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1DP48730 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
CSNK1DP48730 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1DP48730 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1DP48730 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1DP48730 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.22■□□□□ 0.35
CSNK1DP48730 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1DP48730 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1DP48730 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
CSNK1DP48730 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1DP48730 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.22■□□□□ 0.35
CSNK1DP48730 FAM185BP-201ENST00000443595 716 ntBASIC17.22■□□□□ 0.35
CSNK1DP48730 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC17.22■□□□□ 0.35
CSNK1DP48730 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.22■□□□□ 0.35
CSNK1DP48730 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.22■□□□□ 0.35
CSNK1DP48730 AC140113.2-201ENST00000604370 208 ntBASIC17.22■□□□□ 0.35
CSNK1DP48730 AC064836.3-201ENST00000607928 673 ntBASIC17.22■□□□□ 0.35
CSNK1DP48730 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.22■□□□□ 0.35
CSNK1DP48730 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.22■□□□□ 0.35
CSNK1DP48730 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CSNK1DP48730 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.22■□□□□ 0.35
CSNK1DP48730 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.22■□□□□ 0.35
CSNK1DP48730 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1DP48730 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
CSNK1DP48730 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.22■□□□□ 0.35
CSNK1DP48730 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CSNK1DP48730 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1DP48730 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CSNK1DP48730 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1DP48730 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1DP48730 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.21■□□□□ 0.35
CSNK1DP48730 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CSNK1DP48730 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1DP48730 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1DP48730 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1DP48730 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1DP48730 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.21■□□□□ 0.35
CSNK1DP48730 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1DP48730 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1DP48730 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.21■□□□□ 0.35
CSNK1DP48730 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.21■□□□□ 0.35
CSNK1DP48730 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1DP48730 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CSNK1DP48730 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CSNK1DP48730 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CSNK1DP48730 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.21■□□□□ 0.35
CSNK1DP48730 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CSNK1DP48730 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.21■□□□□ 0.35
CSNK1DP48730 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.21■□□□□ 0.35
CSNK1DP48730 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1DP48730 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1DP48730 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1DP48730 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CSNK1DP48730 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
CSNK1DP48730 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.21■□□□□ 0.34
CSNK1DP48730 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
CSNK1DP48730 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1DP48730 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1DP48730 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.2■□□□□ 0.34
CSNK1DP48730 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1DP48730 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1DP48730 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.2■□□□□ 0.34
CSNK1DP48730 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.2■□□□□ 0.34
CSNK1DP48730 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1DP48730 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1DP48730 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1DP48730 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1DP48730 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1DP48730 AL021920.2-201ENST00000624828 1351 ntBASIC17.2■□□□□ 0.34
CSNK1DP48730 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.2■□□□□ 0.34
CSNK1DP48730 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1DP48730 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1DP48730 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CSNK1DP48730 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
CSNK1DP48730 IGLL3P-201ENST00000412472 434 ntBASIC17.2■□□□□ 0.34
CSNK1DP48730 MED15P5-201ENST00000423150 992 ntBASIC17.2■□□□□ 0.34
CSNK1DP48730 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.2■□□□□ 0.34
CSNK1DP48730 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.2■□□□□ 0.34
CSNK1DP48730 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.2■□□□□ 0.34
CSNK1DP48730 KRT18P3-201ENST00000451602 1288 ntBASIC17.2■□□□□ 0.34
CSNK1DP48730 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms