Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF4P23510 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
TNFSF4P23510 AL138688.1-201ENST00000624851 1594 ntBASIC14.78□□□□□ -0.04
TNFSF4P23510 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TNFSF4P23510 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TNFSF4P23510 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF4P23510 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF4P23510 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF4P23510 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.78□□□□□ -0.04
TNFSF4P23510 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFSF4P23510 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF4P23510 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.78□□□□□ -0.04
TNFSF4P23510 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFSF4P23510 RNPS1P1-201ENST00000507437 918 ntBASIC14.78□□□□□ -0.04
TNFSF4P23510 OR7E14P-202ENST00000530490 1290 ntBASIC14.78□□□□□ -0.04
TNFSF4P23510 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
TNFSF4P23510 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.78□□□□□ -0.04
TNFSF4P23510 AC139887.3-201ENST00000568585 713 ntBASIC14.78□□□□□ -0.04
TNFSF4P23510 AL121894.2-201ENST00000602977 491 ntBASIC14.78□□□□□ -0.04
TNFSF4P23510 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF4P23510 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.78□□□□□ -0.04
TNFSF4P23510 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TNFSF4P23510 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF4P23510 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF4P23510 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TNFSF4P23510 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.77□□□□□ -0.04
TNFSF4P23510 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.77□□□□□ -0.04
TNFSF4P23510 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFSF4P23510 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
TNFSF4P23510 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TNFSF4P23510 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TNFSF4P23510 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC14.77□□□□□ -0.04
TNFSF4P23510 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFSF4P23510 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.77□□□□□ -0.04
TNFSF4P23510 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
TNFSF4P23510 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFSF4P23510 LYSMD4-203ENST00000378904 2122 ntBASIC14.77□□□□□ -0.04
TNFSF4P23510 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.77□□□□□ -0.04
TNFSF4P23510 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFSF4P23510 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TNFSF4P23510 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFSF4P23510 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.77□□□□□ -0.04
TNFSF4P23510 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFSF4P23510 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
TNFSF4P23510 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TNFSF4P23510 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TNFSF4P23510 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TNFSF4P23510 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFSF4P23510 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TNFSF4P23510 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TNFSF4P23510 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.77□□□□□ -0.05
TNFSF4P23510 LAGE3P1-201ENST00000425356 484 ntBASIC14.77□□□□□ -0.05
TNFSF4P23510 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFSF4P23510 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.77□□□□□ -0.05
TNFSF4P23510 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.77□□□□□ -0.05
TNFSF4P23510 AC021087.4-201ENST00000563761 564 ntBASIC14.77□□□□□ -0.05
TNFSF4P23510 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.77□□□□□ -0.05
TNFSF4P23510 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.77□□□□□ -0.05
TNFSF4P23510 AC006557.2-201ENST00000592985 1240 ntBASIC14.77□□□□□ -0.05
TNFSF4P23510 AL589182.2-201ENST00000619332 1049 ntBASIC14.77□□□□□ -0.05
TNFSF4P23510 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
TNFSF4P23510 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFSF4P23510 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.77□□□□□ -0.05
TNFSF4P23510 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFSF4P23510 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
TNFSF4P23510 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFSF4P23510 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
TNFSF4P23510 AC068880.1-201ENST00000507289 2297 ntBASIC14.77□□□□□ -0.05
TNFSF4P23510 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TNFSF4P23510 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.77□□□□□ -0.05
TNFSF4P23510 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TNFSF4P23510 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.77□□□□□ -0.05
TNFSF4P23510 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TNFSF4P23510 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TNFSF4P23510 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
TNFSF4P23510 AC016396.2-201ENST00000562575 1417 ntBASIC14.76□□□□□ -0.05
TNFSF4P23510 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFSF4P23510 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFSF4P23510 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
TNFSF4P23510 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFSF4P23510 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.76□□□□□ -0.05
TNFSF4P23510 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.76□□□□□ -0.05
TNFSF4P23510 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFSF4P23510 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFSF4P23510 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
TNFSF4P23510 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.76□□□□□ -0.05
TNFSF4P23510 AC026396.1-201ENST00000419388 421 ntBASIC14.76□□□□□ -0.05
TNFSF4P23510 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC14.76□□□□□ -0.05
TNFSF4P23510 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC14.76□□□□□ -0.05
TNFSF4P23510 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.76□□□□□ -0.05
TNFSF4P23510 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFSF4P23510 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.76□□□□□ -0.05
TNFSF4P23510 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.76□□□□□ -0.05
TNFSF4P23510 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.76□□□□□ -0.05
TNFSF4P23510 MIR1199-201ENST00000621445 119 ntBASIC14.76□□□□□ -0.05
TNFSF4P23510 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.76□□□□□ -0.05
TNFSF4P23510 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFSF4P23510 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
TNFSF4P23510 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
TNFSF4P23510 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms