Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
XPAP23025 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.42■□□□□ 0.38
XPAP23025 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.42■□□□□ 0.38
XPAP23025 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.42■□□□□ 0.38
XPAP23025 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.42■□□□□ 0.38
XPAP23025 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.42■□□□□ 0.38
XPAP23025 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
XPAP23025 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
XPAP23025 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
XPAP23025 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
XPAP23025 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.42■□□□□ 0.38
XPAP23025 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
XPAP23025 AL135999.2-201ENST00000622438 1686 ntBASIC17.42■□□□□ 0.38
XPAP23025 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
XPAP23025 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
XPAP23025 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
XPAP23025 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
XPAP23025 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
XPAP23025 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.41■□□□□ 0.38
XPAP23025 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.41■□□□□ 0.38
XPAP23025 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.41■□□□□ 0.38
XPAP23025 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
XPAP23025 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
XPAP23025 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
XPAP23025 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
XPAP23025 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
XPAP23025 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
XPAP23025 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
XPAP23025 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
XPAP23025 ELK2BP-201ENST00000415014 1224 ntBASIC17.41■□□□□ 0.38
XPAP23025 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.41■□□□□ 0.38
XPAP23025 ARTN-206ENST00000472435 402 ntTSL 3 BASIC17.41■□□□□ 0.38
XPAP23025 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.41■□□□□ 0.38
XPAP23025 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.41■□□□□ 0.38
XPAP23025 AF228730.7-201ENST00000641842 219 ntBASIC17.41■□□□□ 0.38
XPAP23025 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
XPAP23025 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
XPAP23025 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
XPAP23025 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
XPAP23025 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
XPAP23025 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
XPAP23025 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
XPAP23025 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
XPAP23025 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
XPAP23025 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
XPAP23025 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
XPAP23025 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
XPAP23025 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
XPAP23025 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
XPAP23025 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
XPAP23025 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
XPAP23025 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
XPAP23025 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.4■□□□□ 0.38
XPAP23025 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.4■□□□□ 0.38
XPAP23025 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
XPAP23025 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
XPAP23025 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.4■□□□□ 0.38
XPAP23025 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.4■□□□□ 0.38
XPAP23025 ACTG1P4-201ENST00000425123 1122 ntBASIC17.4■□□□□ 0.38
XPAP23025 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.4■□□□□ 0.38
XPAP23025 RNA5SP415-201ENST00000517246 115 ntBASIC17.4■□□□□ 0.38
XPAP23025 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.4■□□□□ 0.38
XPAP23025 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.4■□□□□ 0.38
XPAP23025 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.4■□□□□ 0.38
XPAP23025 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.4■□□□□ 0.38
XPAP23025 AC117500.6-201ENST00000624871 588 ntBASIC17.4■□□□□ 0.38
XPAP23025 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.4■□□□□ 0.38
XPAP23025 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
XPAP23025 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
XPAP23025 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.4■□□□□ 0.38
XPAP23025 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.4■□□□□ 0.38
XPAP23025 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
XPAP23025 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
XPAP23025 AC006504.4-201ENST00000592118 1568 ntBASIC17.4■□□□□ 0.38
XPAP23025 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
XPAP23025 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
XPAP23025 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
XPAP23025 AC104109.2-201ENST00000602919 1418 ntBASIC17.39■□□□□ 0.38
XPAP23025 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
XPAP23025 NOC2LP2-201ENST00000407594 1944 ntBASIC17.39■□□□□ 0.37
XPAP23025 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
XPAP23025 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.39■□□□□ 0.37
XPAP23025 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
XPAP23025 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
XPAP23025 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
XPAP23025 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
XPAP23025 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.39■□□□□ 0.37
XPAP23025 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
XPAP23025 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.39■□□□□ 0.37
XPAP23025 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
XPAP23025 KRT18P27-201ENST00000427733 1299 ntBASIC17.39■□□□□ 0.37
XPAP23025 SLC25A1P1-201ENST00000528351 927 ntBASIC17.39■□□□□ 0.37
XPAP23025 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.39■□□□□ 0.37
XPAP23025 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
XPAP23025 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.39■□□□□ 0.37
XPAP23025 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
XPAP23025 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.39■□□□□ 0.37
XPAP23025 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
XPAP23025 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
XPAP23025 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms