Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.79■□□□□ 0.6
RFX1P22670 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.79■□□□□ 0.6
RFX1P22670 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
RFX1P22670 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX1P22670 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RFX1P22670 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFX1P22670 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX1P22670 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX1P22670 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.79■□□□□ 0.6
RFX1P22670 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX1P22670 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFX1P22670 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RFX1P22670 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX1P22670 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
RFX1P22670 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.79■□□□□ 0.6
RFX1P22670 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFX1P22670 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX1P22670 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX1P22670 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.78■□□□□ 0.6
RFX1P22670 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.78■□□□□ 0.6
RFX1P22670 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.78■□□□□ 0.6
RFX1P22670 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.78■□□□□ 0.6
RFX1P22670 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RFX1P22670 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RFX1P22670 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.78■□□□□ 0.6
RFX1P22670 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX1P22670 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.78■□□□□ 0.6
RFX1P22670 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX1P22670 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX1P22670 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RFX1P22670 LINC02012-201ENST00000608206 1725 ntBASIC18.78■□□□□ 0.6
RFX1P22670 AC093525.9-201ENST00000624961 1746 ntBASIC18.78■□□□□ 0.6
RFX1P22670 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX1P22670 AC003669.1-201ENST00000334569 611 ntBASIC18.78■□□□□ 0.6
RFX1P22670 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX1P22670 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX1P22670 SLC25A1P3-201ENST00000395415 828 ntBASIC18.78■□□□□ 0.6
RFX1P22670 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.78■□□□□ 0.6
RFX1P22670 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RFX1P22670 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.78■□□□□ 0.6
RFX1P22670 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX1P22670 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.78■□□□□ 0.6
RFX1P22670 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.78■□□□□ 0.6
RFX1P22670 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.78■□□□□ 0.6
RFX1P22670 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.78■□□□□ 0.6
RFX1P22670 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC18.78■□□□□ 0.6
RFX1P22670 BNIP3P18-201ENST00000593976 575 ntBASIC18.78■□□□□ 0.6
RFX1P22670 MIR7706-201ENST00000613747 67 ntBASIC18.78■□□□□ 0.6
RFX1P22670 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RFX1P22670 AC079781.4-201ENST00000641908 219 ntBASIC18.78■□□□□ 0.6
RFX1P22670 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RFX1P22670 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX1P22670 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX1P22670 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RFX1P22670 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RFX1P22670 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RFX1P22670 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.78■□□□□ 0.6
RFX1P22670 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.78■□□□□ 0.6
RFX1P22670 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX1P22670 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX1P22670 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFX1P22670 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.78■□□□□ 0.6
RFX1P22670 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFX1P22670 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RFX1P22670 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RFX1P22670 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFX1P22670 AC080080.1-201ENST00000625121 2420 ntBASIC18.77■□□□□ 0.6
RFX1P22670 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFX1P22670 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFX1P22670 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.77■□□□□ 0.6
RFX1P22670 RPS8P6-201ENST00000426177 609 ntBASIC18.77■□□□□ 0.6
RFX1P22670 AC098831.1-202ENST00000438821 336 ntBASIC18.77■□□□□ 0.6
RFX1P22670 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.77■□□□□ 0.6
RFX1P22670 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RFX1P22670 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.77■□□□□ 0.6
RFX1P22670 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.77■□□□□ 0.6
RFX1P22670 MIR3687-2-201ENST00000577708 61 ntBASIC18.77■□□□□ 0.6
RFX1P22670 AL049840.3-201ENST00000602669 611 ntBASIC18.77■□□□□ 0.6
RFX1P22670 MIR3687-1-201ENST00000614492 61 ntBASIC18.77■□□□□ 0.6
RFX1P22670 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.77■□□□□ 0.6
RFX1P22670 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.77■□□□□ 0.6
RFX1P22670 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFX1P22670 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFX1P22670 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFX1P22670 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RFX1P22670 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RFX1P22670 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.77■□□□□ 0.59
RFX1P22670 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.77■□□□□ 0.59
RFX1P22670 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
RFX1P22670 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.59
RFX1P22670 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.77■□□□□ 0.59
RFX1P22670 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.76■□□□□ 0.59
RFX1P22670 AD000864.1-201ENST00000624076 2295 ntBASIC18.76■□□□□ 0.59
RFX1P22670 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.76■□□□□ 0.59
RFX1P22670 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFX1P22670 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.76■□□□□ 0.59
RFX1P22670 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.76■□□□□ 0.59
RFX1P22670 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms