Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
CAPN3P20807 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.64■□□□□ 0.25
CAPN3P20807 AC112907.2-201ENST00000448639 330 ntBASIC16.64■□□□□ 0.25
CAPN3P20807 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.64■□□□□ 0.25
CAPN3P20807 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.64■□□□□ 0.25
CAPN3P20807 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.64■□□□□ 0.25
CAPN3P20807 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
CAPN3P20807 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CAPN3P20807 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
CAPN3P20807 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CAPN3P20807 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN3P20807 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN3P20807 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN3P20807 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN3P20807 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CAPN3P20807 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN3P20807 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CAPN3P20807 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN3P20807 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.63■□□□□ 0.25
CAPN3P20807 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN3P20807 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN3P20807 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.63■□□□□ 0.25
CAPN3P20807 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN3P20807 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN3P20807 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN3P20807 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN3P20807 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN3P20807 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.63■□□□□ 0.25
CAPN3P20807 STARP1-201ENST00000397973 869 ntBASIC16.63■□□□□ 0.25
CAPN3P20807 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.63■□□□□ 0.25
CAPN3P20807 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
CAPN3P20807 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.63■□□□□ 0.25
CAPN3P20807 AC023511.2-201ENST00000618803 211 ntBASIC16.63■□□□□ 0.25
CAPN3P20807 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.63■□□□□ 0.25
CAPN3P20807 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
CAPN3P20807 AC079328.2-201ENST00000561241 3354 ntBASIC16.63■□□□□ 0.25
CAPN3P20807 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.63■□□□□ 0.25
CAPN3P20807 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN3P20807 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CAPN3P20807 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CAPN3P20807 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN3P20807 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN3P20807 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.63■□□□□ 0.25
CAPN3P20807 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN3P20807 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CAPN3P20807 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CAPN3P20807 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CAPN3P20807 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN3P20807 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
CAPN3P20807 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.62■□□□□ 0.25
CAPN3P20807 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN3P20807 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.62■□□□□ 0.25
CAPN3P20807 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.62■□□□□ 0.25
CAPN3P20807 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN3P20807 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN3P20807 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CAPN3P20807 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN3P20807 PKD1P1-201ENST00000458669 6805 ntBASIC16.62■□□□□ 0.25
CAPN3P20807 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
CAPN3P20807 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN3P20807 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN3P20807 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN3P20807 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.62■□□□□ 0.25
CAPN3P20807 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN3P20807 COX5BP2-201ENST00000392354 334 ntBASIC16.62■□□□□ 0.25
CAPN3P20807 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.62■□□□□ 0.25
CAPN3P20807 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.62■□□□□ 0.25
CAPN3P20807 KRT18P38-201ENST00000449496 1282 ntBASIC16.62■□□□□ 0.25
CAPN3P20807 AC092597.1-201ENST00000487352 616 ntBASIC16.62■□□□□ 0.25
CAPN3P20807 AP003733.1-201ENST00000491725 852 ntBASIC16.62■□□□□ 0.25
CAPN3P20807 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN3P20807 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.62■□□□□ 0.25
CAPN3P20807 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN3P20807 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.62■□□□□ 0.25
CAPN3P20807 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.62■□□□□ 0.25
CAPN3P20807 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN3P20807 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN3P20807 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN3P20807 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.62■□□□□ 0.25
CAPN3P20807 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.62■□□□□ 0.25
CAPN3P20807 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.62■□□□□ 0.25
CAPN3P20807 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN3P20807 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.62■□□□□ 0.25
CAPN3P20807 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN3P20807 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CAPN3P20807 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms