Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 IFNL4P1-201ENST00000607083 540 ntBASIC17.43■□□□□ 0.38
HLA-DPA1P20036 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 AL022326.1-202ENST00000641533 845 ntBASIC17.43■□□□□ 0.38
HLA-DPA1P20036 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HLA-DPA1P20036 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPA1P20036 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPA1P20036 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.42■□□□□ 0.38
HLA-DPA1P20036 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPA1P20036 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPA1P20036 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.42■□□□□ 0.38
HLA-DPA1P20036 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPA1P20036 AKR1C7P-201ENST00000305623 895 ntBASIC17.42■□□□□ 0.38
HLA-DPA1P20036 AL450487.1-201ENST00000426799 995 ntBASIC17.42■□□□□ 0.38
HLA-DPA1P20036 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.42■□□□□ 0.38
HLA-DPA1P20036 FGFR3P6-201ENST00000457012 610 ntBASIC17.42■□□□□ 0.38
HLA-DPA1P20036 BX005266.1-201ENST00000473402 457 ntBASIC17.42■□□□□ 0.38
HLA-DPA1P20036 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.42■□□□□ 0.38
HLA-DPA1P20036 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPA1P20036 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.42■□□□□ 0.38
HLA-DPA1P20036 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.42■□□□□ 0.38
HLA-DPA1P20036 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.42■□□□□ 0.38
HLA-DPA1P20036 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPA1P20036 NKAPP1-205ENST00000585790 367 ntBASIC17.42■□□□□ 0.38
HLA-DPA1P20036 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.42■□□□□ 0.38
HLA-DPA1P20036 AC097637.2-201ENST00000624096 1997 ntBASIC17.42■□□□□ 0.38
HLA-DPA1P20036 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.42■□□□□ 0.38
HLA-DPA1P20036 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
HLA-DPA1P20036 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 AC004817.3-201ENST00000602957 2129 ntBASIC17.41■□□□□ 0.38
HLA-DPA1P20036 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 SCARNA2-201ENST00000458748 420 ntBASIC17.41■□□□□ 0.38
HLA-DPA1P20036 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
HLA-DPA1P20036 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 LTB4R2-202ENST00000528054 3092 ntBASIC17.4■□□□□ 0.38
HLA-DPA1P20036 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HLA-DPA1P20036 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms