Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CD28P10747 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD28P10747 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD28P10747 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD28P10747 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CD28P10747 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD28P10747 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.5□□□□□ -0.25
CD28P10747 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.5□□□□□ -0.25
CD28P10747 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.5□□□□□ -0.25
CD28P10747 ALG1L5P-201ENST00000482043 771 ntBASIC13.5□□□□□ -0.25
CD28P10747 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD28P10747 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CD28P10747 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.5□□□□□ -0.25
CD28P10747 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.5□□□□□ -0.25
CD28P10747 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.5□□□□□ -0.25
CD28P10747 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.5□□□□□ -0.25
CD28P10747 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
CD28P10747 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.5□□□□□ -0.25
CD28P10747 AC010654.1-201ENST00000615722 808 ntBASIC13.5□□□□□ -0.25
CD28P10747 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD28P10747 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.5□□□□□ -0.25
CD28P10747 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD28P10747 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD28P10747 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD28P10747 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CD28P10747 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD28P10747 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD28P10747 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD28P10747 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC13.5□□□□□ -0.25
CD28P10747 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD28P10747 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD28P10747 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
CD28P10747 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CD28P10747 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.49□□□□□ -0.25
CD28P10747 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD28P10747 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.49□□□□□ -0.25
CD28P10747 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC13.49□□□□□ -0.25
CD28P10747 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
CD28P10747 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.49□□□□□ -0.25
CD28P10747 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CD28P10747 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CD28P10747 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CD28P10747 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CD28P10747 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CD28P10747 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CD28P10747 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD28P10747 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD28P10747 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD28P10747 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD28P10747 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CD28P10747 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CD28P10747 AP002414.1-201ENST00000391405 1147 ntBASIC13.49□□□□□ -0.25
CD28P10747 IGLL3P-201ENST00000412472 434 ntBASIC13.49□□□□□ -0.25
CD28P10747 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.49□□□□□ -0.25
CD28P10747 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CD28P10747 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD28P10747 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.49□□□□□ -0.25
CD28P10747 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.49□□□□□ -0.25
CD28P10747 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.49□□□□□ -0.25
CD28P10747 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.49□□□□□ -0.25
CD28P10747 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.49□□□□□ -0.25
CD28P10747 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.49□□□□□ -0.25
CD28P10747 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
CD28P10747 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC13.49□□□□□ -0.25
CD28P10747 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CD28P10747 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD28P10747 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC13.49□□□□□ -0.25
CD28P10747 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC13.49□□□□□ -0.25
CD28P10747 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.49□□□□□ -0.25
CD28P10747 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD28P10747 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD28P10747 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CD28P10747 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CD28P10747 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC13.48□□□□□ -0.25
CD28P10747 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CD28P10747 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CD28P10747 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CD28P10747 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.48□□□□□ -0.25
CD28P10747 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.48□□□□□ -0.25
CD28P10747 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD28P10747 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CD28P10747 PMS2P2-201ENST00000425039 1128 ntBASIC13.48□□□□□ -0.25
CD28P10747 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.48□□□□□ -0.25
CD28P10747 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD28P10747 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.48□□□□□ -0.25
CD28P10747 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CD28P10747 MIR4469-201ENST00000583919 79 ntBASIC13.48□□□□□ -0.25
CD28P10747 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.48□□□□□ -0.25
CD28P10747 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.48□□□□□ -0.25
CD28P10747 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.48□□□□□ -0.25
CD28P10747 AL078644.1-201ENST00000609881 752 ntBASIC13.48□□□□□ -0.25
CD28P10747 GGTLC5P-201ENST00000617623 998 ntBASIC13.48□□□□□ -0.25
CD28P10747 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.48□□□□□ -0.25
CD28P10747 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD28P10747 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD28P10747 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
CD28P10747 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD28P10747 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CD28P10747 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CD28P10747 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms