Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 AC004706.3-202ENST00000621574 984 ntBASIC18.88■□□□□ 0.61
CLTAP09496 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLTAP09496 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLTAP09496 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLTAP09496 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLTAP09496 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLTAP09496 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLTAP09496 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLTAP09496 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLTAP09496 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLTAP09496 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLTAP09496 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.88■□□□□ 0.61
CLTAP09496 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLTAP09496 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLTAP09496 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLTAP09496 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLTAP09496 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.88■□□□□ 0.61
CLTAP09496 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLTAP09496 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLTAP09496 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLTAP09496 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLTAP09496 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLTAP09496 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLTAP09496 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLTAP09496 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLTAP09496 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLTAP09496 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLTAP09496 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CLTAP09496 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLTAP09496 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLTAP09496 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLTAP09496 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLTAP09496 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLTAP09496 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.87■□□□□ 0.61
CLTAP09496 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLTAP09496 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLTAP09496 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.87■□□□□ 0.61
CLTAP09496 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLTAP09496 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.87■□□□□ 0.61
CLTAP09496 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.87■□□□□ 0.61
CLTAP09496 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.87■□□□□ 0.61
CLTAP09496 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLTAP09496 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.87■□□□□ 0.61
CLTAP09496 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.87■□□□□ 0.61
CLTAP09496 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.87■□□□□ 0.61
CLTAP09496 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.87■□□□□ 0.61
CLTAP09496 AL135999.2-201ENST00000622438 1686 ntBASIC18.87■□□□□ 0.61
CLTAP09496 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLTAP09496 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLTAP09496 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLTAP09496 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLTAP09496 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.87■□□□□ 0.61
CLTAP09496 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLTAP09496 PP12613-201ENST00000424958 2230 ntBASIC18.86■□□□□ 0.61
CLTAP09496 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLTAP09496 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLTAP09496 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CLTAP09496 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLTAP09496 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CLTAP09496 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLTAP09496 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
CLTAP09496 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLTAP09496 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLTAP09496 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.86■□□□□ 0.61
CLTAP09496 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLTAP09496 IL9RP2-201ENST00000423948 1312 ntBASIC18.86■□□□□ 0.61
CLTAP09496 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.86■□□□□ 0.61
CLTAP09496 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLTAP09496 LINC00982-205ENST00000420957 435 ntBASIC18.86■□□□□ 0.61
CLTAP09496 ACTG1P4-201ENST00000425123 1122 ntBASIC18.86■□□□□ 0.61
CLTAP09496 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.86■□□□□ 0.61
CLTAP09496 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLTAP09496 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.86■□□□□ 0.61
CLTAP09496 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.86■□□□□ 0.61
CLTAP09496 AL139424.1-201ENST00000607572 797 ntBASIC18.86■□□□□ 0.61
CLTAP09496 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLTAP09496 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLTAP09496 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLTAP09496 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.86■□□□□ 0.61
CLTAP09496 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLTAP09496 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
CLTAP09496 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.86■□□□□ 0.61
CLTAP09496 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLTAP09496 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLTAP09496 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CLTAP09496 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.86■□□□□ 0.61
CLTAP09496 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.86■□□□□ 0.61
CLTAP09496 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.86■□□□□ 0.61
CLTAP09496 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CLTAP09496 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CLTAP09496 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.85■□□□□ 0.61
CLTAP09496 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLTAP09496 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.85■□□□□ 0.61
CLTAP09496 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLTAP09496 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLTAP09496 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLTAP09496 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CLTAP09496 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CLTAP09496 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.85■□□□□ 0.61
CLTAP09496 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms