Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CYP3A4P08684 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
CYP3A4P08684 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.29■□□□□ 0.68
CYP3A4P08684 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CYP3A4P08684 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC19.29■□□□□ 0.68
CYP3A4P08684 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CYP3A4P08684 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CYP3A4P08684 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CYP3A4P08684 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CYP3A4P08684 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.29■□□□□ 0.68
CYP3A4P08684 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CYP3A4P08684 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CYP3A4P08684 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CYP3A4P08684 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.29■□□□□ 0.68
CYP3A4P08684 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.29■□□□□ 0.68
CYP3A4P08684 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.29■□□□□ 0.68
CYP3A4P08684 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.29■□□□□ 0.68
CYP3A4P08684 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.29■□□□□ 0.68
CYP3A4P08684 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
CYP3A4P08684 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CYP3A4P08684 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CYP3A4P08684 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CYP3A4P08684 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CYP3A4P08684 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CYP3A4P08684 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CYP3A4P08684 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CYP3A4P08684 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CYP3A4P08684 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CYP3A4P08684 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.28■□□□□ 0.68
CYP3A4P08684 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
CYP3A4P08684 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CYP3A4P08684 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CYP3A4P08684 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CYP3A4P08684 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CYP3A4P08684 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CYP3A4P08684 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.28■□□□□ 0.68
CYP3A4P08684 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CYP3A4P08684 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CYP3A4P08684 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.28■□□□□ 0.68
CYP3A4P08684 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CYP3A4P08684 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.28■□□□□ 0.68
CYP3A4P08684 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.28■□□□□ 0.68
CYP3A4P08684 AC004832.2-201ENST00000426397 482 ntBASIC19.28■□□□□ 0.68
CYP3A4P08684 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.28■□□□□ 0.68
CYP3A4P08684 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.28■□□□□ 0.68
CYP3A4P08684 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.28■□□□□ 0.68
CYP3A4P08684 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.28■□□□□ 0.68
CYP3A4P08684 MMP17-203ENST00000535004 719 ntTSL 3 BASIC19.28■□□□□ 0.68
CYP3A4P08684 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CYP3A4P08684 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
CYP3A4P08684 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.28■□□□□ 0.68
CYP3A4P08684 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.28■□□□□ 0.68
CYP3A4P08684 AC004877.2-201ENST00000623941 599 ntBASIC19.28■□□□□ 0.68
CYP3A4P08684 AC092865.6-201ENST00000642101 219 ntBASIC19.28■□□□□ 0.68
CYP3A4P08684 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CYP3A4P08684 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CYP3A4P08684 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CYP3A4P08684 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC19.28■□□□□ 0.68
CYP3A4P08684 TOP3BP1-201ENST00000420768 1380 ntBASIC19.28■□□□□ 0.68
CYP3A4P08684 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CYP3A4P08684 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CYP3A4P08684 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CYP3A4P08684 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CYP3A4P08684 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CYP3A4P08684 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CYP3A4P08684 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
CYP3A4P08684 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.27■□□□□ 0.68
CYP3A4P08684 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CYP3A4P08684 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CYP3A4P08684 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CYP3A4P08684 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CYP3A4P08684 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CYP3A4P08684 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CYP3A4P08684 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CYP3A4P08684 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.27■□□□□ 0.68
CYP3A4P08684 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CYP3A4P08684 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
CYP3A4P08684 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.27■□□□□ 0.68
CYP3A4P08684 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.27■□□□□ 0.68
CYP3A4P08684 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.27■□□□□ 0.68
CYP3A4P08684 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.27■□□□□ 0.68
CYP3A4P08684 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CYP3A4P08684 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.27■□□□□ 0.68
CYP3A4P08684 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.27■□□□□ 0.68
CYP3A4P08684 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.27■□□□□ 0.68
CYP3A4P08684 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CYP3A4P08684 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CYP3A4P08684 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CYP3A4P08684 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
CYP3A4P08684 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CYP3A4P08684 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.27■□□□□ 0.67
CYP3A4P08684 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CYP3A4P08684 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CYP3A4P08684 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CYP3A4P08684 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CYP3A4P08684 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CYP3A4P08684 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CYP3A4P08684 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CYP3A4P08684 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CYP3A4P08684 AC023274.1-201ENST00000418278 595 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms