Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APOA4P06727 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APOA4P06727 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
APOA4P06727 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
APOA4P06727 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APOA4P06727 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APOA4P06727 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
APOA4P06727 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APOA4P06727 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APOA4P06727 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
APOA4P06727 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
APOA4P06727 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
APOA4P06727 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
APOA4P06727 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
APOA4P06727 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
APOA4P06727 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
APOA4P06727 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.31■□□□□ 0.36
APOA4P06727 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
APOA4P06727 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.31■□□□□ 0.36
APOA4P06727 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.31■□□□□ 0.36
APOA4P06727 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
APOA4P06727 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
APOA4P06727 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
APOA4P06727 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
APOA4P06727 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
APOA4P06727 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.31■□□□□ 0.36
APOA4P06727 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
APOA4P06727 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
APOA4P06727 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.31■□□□□ 0.36
APOA4P06727 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.31■□□□□ 0.36
APOA4P06727 AC111152.3-201ENST00000569699 673 ntBASIC17.31■□□□□ 0.36
APOA4P06727 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.31■□□□□ 0.36
APOA4P06727 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.31■□□□□ 0.36
APOA4P06727 AC114341.1-201ENST00000618070 349 ntBASIC17.31■□□□□ 0.36
APOA4P06727 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
APOA4P06727 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
APOA4P06727 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
APOA4P06727 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
APOA4P06727 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
APOA4P06727 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
APOA4P06727 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
APOA4P06727 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.31■□□□□ 0.36
APOA4P06727 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
APOA4P06727 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
APOA4P06727 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
APOA4P06727 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
APOA4P06727 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.31■□□□□ 0.36
APOA4P06727 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOA4P06727 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
APOA4P06727 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.3■□□□□ 0.36
APOA4P06727 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
APOA4P06727 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.3■□□□□ 0.36
APOA4P06727 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOA4P06727 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APOA4P06727 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
APOA4P06727 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.3■□□□□ 0.36
APOA4P06727 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
APOA4P06727 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOA4P06727 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APOA4P06727 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.3■□□□□ 0.36
APOA4P06727 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.3■□□□□ 0.36
APOA4P06727 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.3■□□□□ 0.36
APOA4P06727 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APOA4P06727 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APOA4P06727 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.3■□□□□ 0.36
APOA4P06727 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
APOA4P06727 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.3■□□□□ 0.36
APOA4P06727 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
APOA4P06727 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.3■□□□□ 0.36
APOA4P06727 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.3■□□□□ 0.36
APOA4P06727 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.3■□□□□ 0.36
APOA4P06727 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOA4P06727 AGGF1P2-201ENST00000426656 2106 ntBASIC17.3■□□□□ 0.36
APOA4P06727 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
APOA4P06727 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOA4P06727 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOA4P06727 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
APOA4P06727 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APOA4P06727 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
APOA4P06727 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.29■□□□□ 0.36
APOA4P06727 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.29■□□□□ 0.36
APOA4P06727 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
APOA4P06727 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.29■□□□□ 0.36
APOA4P06727 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOA4P06727 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOA4P06727 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOA4P06727 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
APOA4P06727 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOA4P06727 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOA4P06727 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOA4P06727 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOA4P06727 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
APOA4P06727 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOA4P06727 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
APOA4P06727 NUS1P2-201ENST00000417358 873 ntBASIC17.29■□□□□ 0.36
APOA4P06727 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.29■□□□□ 0.36
APOA4P06727 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
APOA4P06727 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.29■□□□□ 0.36
APOA4P06727 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.29■□□□□ 0.36
APOA4P06727 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms