Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.15■□□□□ 0.18
OPN1SWP03999 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
OPN1SWP03999 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.15■□□□□ 0.18
OPN1SWP03999 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
OPN1SWP03999 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.15■□□□□ 0.18
OPN1SWP03999 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
OPN1SWP03999 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
OPN1SWP03999 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
OPN1SWP03999 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
OPN1SWP03999 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
OPN1SWP03999 AC008741.2-201ENST00000612792 3115 ntBASIC16.14■□□□□ 0.18
OPN1SWP03999 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.18
OPN1SWP03999 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.14■□□□□ 0.17
OPN1SWP03999 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.14■□□□□ 0.17
OPN1SWP03999 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
OPN1SWP03999 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPN1SWP03999 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPN1SWP03999 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPN1SWP03999 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPN1SWP03999 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
OPN1SWP03999 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPN1SWP03999 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
OPN1SWP03999 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPN1SWP03999 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
OPN1SWP03999 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPN1SWP03999 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPN1SWP03999 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.14■□□□□ 0.17
OPN1SWP03999 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPN1SWP03999 AC104076.2-201ENST00000448912 469 ntBASIC16.14■□□□□ 0.17
OPN1SWP03999 GUSBP12-201ENST00000513727 720 ntBASIC16.14■□□□□ 0.17
OPN1SWP03999 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.14■□□□□ 0.17
OPN1SWP03999 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.14■□□□□ 0.17
OPN1SWP03999 AL592071.1-201ENST00000611956 408 ntBASIC16.14■□□□□ 0.17
OPN1SWP03999 AC124864.1-201ENST00000623408 392 ntBASIC16.14■□□□□ 0.17
OPN1SWP03999 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPN1SWP03999 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.14■□□□□ 0.17
OPN1SWP03999 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
OPN1SWP03999 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
OPN1SWP03999 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPN1SWP03999 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPN1SWP03999 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
OPN1SWP03999 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.14■□□□□ 0.17
OPN1SWP03999 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
OPN1SWP03999 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
OPN1SWP03999 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPN1SWP03999 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
OPN1SWP03999 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
OPN1SWP03999 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.14■□□□□ 0.17
OPN1SWP03999 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
OPN1SWP03999 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
OPN1SWP03999 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
OPN1SWP03999 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPN1SWP03999 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.14■□□□□ 0.17
OPN1SWP03999 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
OPN1SWP03999 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
OPN1SWP03999 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.13■□□□□ 0.17
OPN1SWP03999 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 AC125634.1-201ENST00000438758 1403 ntBASIC16.13■□□□□ 0.17
OPN1SWP03999 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.13■□□□□ 0.17
OPN1SWP03999 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.13■□□□□ 0.17
OPN1SWP03999 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.13■□□□□ 0.17
OPN1SWP03999 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.13■□□□□ 0.17
OPN1SWP03999 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.13■□□□□ 0.17
OPN1SWP03999 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
OPN1SWP03999 TSPY22P-201ENST00000427496 604 ntBASIC16.13■□□□□ 0.17
OPN1SWP03999 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.13■□□□□ 0.17
OPN1SWP03999 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.13■□□□□ 0.17
OPN1SWP03999 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.13■□□□□ 0.17
OPN1SWP03999 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.13■□□□□ 0.17
OPN1SWP03999 AC005336.2-201ENST00000593183 939 ntBASIC16.13■□□□□ 0.17
OPN1SWP03999 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
OPN1SWP03999 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
OPN1SWP03999 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.13■□□□□ 0.17
OPN1SWP03999 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.13■□□□□ 0.17
OPN1SWP03999 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
OPN1SWP03999 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
OPN1SWP03999 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
OPN1SWP03999 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms