Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.98■□□□□ 0.63
CD4P01730 SPDYE11-202ENST00000450699 704 ntBASIC18.98■□□□□ 0.63
CD4P01730 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.98■□□□□ 0.63
CD4P01730 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.98■□□□□ 0.63
CD4P01730 SPDYE9P-201ENST00000570642 692 ntBASIC18.98■□□□□ 0.63
CD4P01730 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.98■□□□□ 0.63
CD4P01730 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.98■□□□□ 0.63
CD4P01730 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD4P01730 SPDYE10P-202ENST00000612005 668 ntBASIC18.98■□□□□ 0.63
CD4P01730 AC138649.4-201ENST00000612222 287 ntBASIC18.98■□□□□ 0.63
CD4P01730 SPDYE8P-202ENST00000612377 668 ntBASIC18.98■□□□□ 0.63
CD4P01730 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.98■□□□□ 0.63
CD4P01730 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.98■□□□□ 0.63
CD4P01730 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD4P01730 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.98■□□□□ 0.63
CD4P01730 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.98■□□□□ 0.63
CD4P01730 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.98■□□□□ 0.63
CD4P01730 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
CD4P01730 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CD4P01730 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD4P01730 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CD4P01730 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD4P01730 AL135999.2-201ENST00000622438 1686 ntBASIC18.98■□□□□ 0.63
CD4P01730 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CD4P01730 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD4P01730 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
CD4P01730 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD4P01730 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CD4P01730 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD4P01730 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CD4P01730 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD4P01730 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CD4P01730 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.97■□□□□ 0.63
CD4P01730 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.97■□□□□ 0.63
CD4P01730 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD4P01730 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.97■□□□□ 0.63
CD4P01730 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD4P01730 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD4P01730 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD4P01730 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.97■□□□□ 0.63
CD4P01730 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.97■□□□□ 0.63
CD4P01730 AC015922.1-201ENST00000421102 1152 ntBASIC18.97■□□□□ 0.63
CD4P01730 FAM58DP-201ENST00000428076 619 ntBASIC18.97■□□□□ 0.63
CD4P01730 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CD4P01730 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CD4P01730 AC079140.1-201ENST00000508039 487 ntBASIC18.97■□□□□ 0.63
CD4P01730 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.97■□□□□ 0.63
CD4P01730 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.97■□□□□ 0.63
CD4P01730 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CD4P01730 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.97■□□□□ 0.63
CD4P01730 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.97■□□□□ 0.63
CD4P01730 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.97■□□□□ 0.63
CD4P01730 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD4P01730 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.97■□□□□ 0.63
CD4P01730 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD4P01730 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD4P01730 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CD4P01730 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD4P01730 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.97■□□□□ 0.63
CD4P01730 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.97■□□□□ 0.63
CD4P01730 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CD4P01730 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD4P01730 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CD4P01730 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD4P01730 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CD4P01730 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.96■□□□□ 0.63
CD4P01730 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CD4P01730 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CD4P01730 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.96■□□□□ 0.63
CD4P01730 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.96■□□□□ 0.63
CD4P01730 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.96■□□□□ 0.63
CD4P01730 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CD4P01730 AL390961.4-201ENST00000623958 2535 ntBASIC18.96■□□□□ 0.63
CD4P01730 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
CD4P01730 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CD4P01730 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD4P01730 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD4P01730 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.96■□□□□ 0.63
CD4P01730 AL592309.1-201ENST00000443127 649 ntBASIC18.96■□□□□ 0.63
CD4P01730 CNN2P2-201ENST00000443536 909 ntBASIC18.96■□□□□ 0.63
CD4P01730 CNN2P3-201ENST00000450201 906 ntBASIC18.96■□□□□ 0.63
CD4P01730 INGX-202ENST00000489074 768 ntBASIC18.96■□□□□ 0.63
CD4P01730 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.96■□□□□ 0.63
CD4P01730 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.96■□□□□ 0.63
CD4P01730 AC243562.1-201ENST00000560672 389 ntBASIC18.96■□□□□ 0.63
CD4P01730 AL136317.3-201ENST00000618497 906 ntBASIC18.96■□□□□ 0.63
CD4P01730 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CD4P01730 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD4P01730 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD4P01730 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.96■□□□□ 0.63
CD4P01730 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD4P01730 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD4P01730 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD4P01730 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD4P01730 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD4P01730 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.96■□□□□ 0.63
CD4P01730 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CD4P01730 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD4P01730 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CD4P01730 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms