Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TIMP1P01033 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TIMP1P01033 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
TIMP1P01033 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TIMP1P01033 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
TIMP1P01033 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TIMP1P01033 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TIMP1P01033 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TIMP1P01033 AP3S2-216ENST00000617003 1561 ntBASIC18.44■□□□□ 0.54
TIMP1P01033 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TIMP1P01033 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TIMP1P01033 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
TIMP1P01033 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TIMP1P01033 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.44■□□□□ 0.54
TIMP1P01033 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.44■□□□□ 0.54
TIMP1P01033 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TIMP1P01033 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TIMP1P01033 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.44■□□□□ 0.54
TIMP1P01033 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.44■□□□□ 0.54
TIMP1P01033 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.44■□□□□ 0.54
TIMP1P01033 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TIMP1P01033 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TIMP1P01033 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.44■□□□□ 0.54
TIMP1P01033 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TIMP1P01033 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TIMP1P01033 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TIMP1P01033 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TIMP1P01033 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TIMP1P01033 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
TIMP1P01033 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TIMP1P01033 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TIMP1P01033 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TIMP1P01033 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TIMP1P01033 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TIMP1P01033 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.43■□□□□ 0.54
TIMP1P01033 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.43■□□□□ 0.54
TIMP1P01033 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.43■□□□□ 0.54
TIMP1P01033 AC142381.1-201ENST00000426099 345 ntBASIC18.43■□□□□ 0.54
TIMP1P01033 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.43■□□□□ 0.54
TIMP1P01033 AC009477.1-201ENST00000452936 217 ntBASIC18.43■□□□□ 0.54
TIMP1P01033 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.43■□□□□ 0.54
TIMP1P01033 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TIMP1P01033 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TIMP1P01033 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TIMP1P01033 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TIMP1P01033 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.43■□□□□ 0.54
TIMP1P01033 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TIMP1P01033 MIR6799-201ENST00000620297 69 ntBASIC18.43■□□□□ 0.54
TIMP1P01033 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TIMP1P01033 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.43■□□□□ 0.54
TIMP1P01033 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TIMP1P01033 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TIMP1P01033 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.43■□□□□ 0.54
TIMP1P01033 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TIMP1P01033 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TIMP1P01033 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TIMP1P01033 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TIMP1P01033 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TIMP1P01033 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TIMP1P01033 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TIMP1P01033 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.42■□□□□ 0.54
TIMP1P01033 SLC22A20-204ENST00000530038 1673 ntBASIC18.42■□□□□ 0.54
TIMP1P01033 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.42■□□□□ 0.54
TIMP1P01033 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.42■□□□□ 0.54
TIMP1P01033 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.42■□□□□ 0.54
TIMP1P01033 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.42■□□□□ 0.54
TIMP1P01033 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.42■□□□□ 0.54
TIMP1P01033 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
TIMP1P01033 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
TIMP1P01033 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TIMP1P01033 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TIMP1P01033 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.42■□□□□ 0.54
TIMP1P01033 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TIMP1P01033 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TIMP1P01033 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TIMP1P01033 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.42■□□□□ 0.54
TIMP1P01033 AC091167.2-201ENST00000579581 588 ntBASIC18.42■□□□□ 0.54
TIMP1P01033 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
TIMP1P01033 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.42■□□□□ 0.54
TIMP1P01033 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TIMP1P01033 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.42■□□□□ 0.54
TIMP1P01033 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.42■□□□□ 0.54
TIMP1P01033 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TIMP1P01033 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.42■□□□□ 0.54
TIMP1P01033 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TIMP1P01033 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TIMP1P01033 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TIMP1P01033 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
TIMP1P01033 AC138969.3-201ENST00000546612 1459 ntBASIC18.41■□□□□ 0.54
TIMP1P01033 AC138932.2-201ENST00000548268 1459 ntBASIC18.41■□□□□ 0.54
TIMP1P01033 AC126755.4-201ENST00000549796 1459 ntBASIC18.41■□□□□ 0.54
TIMP1P01033 AC007541.1-201ENST00000570282 1469 ntBASIC18.41■□□□□ 0.54
TIMP1P01033 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TIMP1P01033 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TIMP1P01033 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TIMP1P01033 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TIMP1P01033 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.41■□□□□ 0.54
TIMP1P01033 AL353779.1-201ENST00000434793 351 ntBASIC18.41■□□□□ 0.54
TIMP1P01033 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.41■□□□□ 0.54
TIMP1P01033 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms